Gene DET0778 details

Gene Information

• Locus tag: DET0778
• Symbol: tmk
• ID: 3229893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 716102
• End bp: 716725
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637120342
• Product: thymidylate kinase
• Protein accession: YP_181510
• Protein GI: 57234426
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTGT TTATAACATT TGAGGGCGGC GAAGGCTGCG GCAAAAGCAC CCAGTCCAAG 
GCATTGTACA GGTATCTGAA AAAACTGGGG CTGGGGTGTG TGCTTACTCA CGAACCCGGC 
GGTACCCGCT CAGGTGATAA AATAACCCGT TTGTTGAAGT GGTCTGAAGA AGAAAATATT 
TCCCCTCTTG CGGAGTTGTT TCTTTTCAAC GCCTCGCGTT CTATCCTTAT AGACAATGTG 
ATTAAACCGG CCTTGCTGGA TGGCAATATA GTTATATGTG ACCGGTATAC AGATTCCACC 
TTGGCATACC AGGGGTACGG GCGGGGGCTT GAGCTGGATA CGGTAAAATG TATAAACAGC 
CTGGCAAGCG GCGGTCTGGT ACCTGACTTA ACCATCTGGC TGGATATGGA TGACAAAGCC 
GCCCTCCTCC GCAAAGGAAA GTTGCCGCCT GACCGCTTTG AAAGTGAAAA TAATGGCTTC 
CACCAAAGGG TTCGTGACGG TTTCGGGGTT ATTGCCGCTG CCGAACCAAA CAGGTTTCTG 
AAGCTGGATG CTTCACTCTC CCAGTCAGAG CTTACCAAAT GTATTAAGCA AAGGGTTAAC 
GCTCTTTTGA AGCTGCCGCA ATGA 

 

Protein sequence

MSLFITFEGG EGCGKSTQSK ALYRYLKKLG LGCVLTHEPG GTRSGDKITR LLKWSEEENI 
SPLAELFLFN ASRSILIDNV IKPALLDGNI VICDRYTDST LAYQGYGRGL ELDTVKCINS 
LASGGLVPDL TIWLDMDDKA ALLRKGKLPP DRFESENNGF HQRVRDGFGV IAAAEPNRFL 
KLDASLSQSE LTKCIKQRVN ALLKLPQ