| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0688 |
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| Symbol | cobD-3 |
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| ID | 3229993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 634376 |
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| End bp | 635302 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120253 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_181430 |
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| Protein GI | 57234525 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGAAGTCC TTTTTATATT CCTGCTGGCG CTCATTATTG ATTTGGTTTT TGGAGACCCG
CCTAATGCTT TTCATCCGGT AGCCTATATG GGCAGGGTAA TTGCCCTTTT TGAGCGGGCA
GGGTTTAAGG GCGGTAGGGT CTACCAGTTT GTTTACGGTA TAGTCATGGT TTTTATTGCC
ATGGCACTTT TTTTTATACC GGTATATTTT CTGCTGGACT GGCTGCATGG AGTAAACAGT
GTAGTTTACA TAATAGTGTC GGCCGTTTTA CTCAAGATGT GTTTTACGGT AACCGGCTTG
CGTAAGGCCG CTTTGCTGAT TAAACAATTG TTAGAAAAAG ATGACATTGC CCAGGCCCGT
TTTGAGCTCC GCTCACTGGT TTCACGTGAT ACCTCCAAAC TGCCTCAGCC CAAACTGGTG
GCGGCGGCGG TGGAATCTGT GGCGGAGAGT ATCGGAGACG GGTTTGTGGC GCCGCTCTTT
TTCTTTCTGA TATTCGGCGT GCCCGGTGTT ATGGCCTACC GGGTAGTTAG CACCTTTGAC
AGCATGGTGG GTTACCGCGG CAAATACGAA TATCTGGGCA AGTTTGCCGC CAGATTTGAT
GATGTGCTTA ATTTTATTCC GGCCAGACTG TCTGCCTTGT GCATACTGAT TGCCAGCTTA
TTTGGGCGTT ACAGCCCGGC AGGGGCATGG CGGATAATGT GGCGTGACCA CGCCAAGACC
CAAAGCCCCA ATGCCGGCTG GCCAATGGCG ACTGCGGCCG GTGCCCTTGA AGTTTGTCTG
GAAAAAGTGG GACACTACTC ACTGGGGGAT AATATCAGGG AGCTTGTTCC CCAAACTATC
AGCCGTTCGC TGCTGCTTAT AAACAGTGCG GCCTTTATCT GGGTTTTAAT AAGCGCGGGA
GTGATTTATT TTGTCCGTAT CGCCTAA
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| Protein sequence | MEVLFIFLLA LIIDLVFGDP PNAFHPVAYM GRVIALFERA GFKGGRVYQF VYGIVMVFIA
MALFFIPVYF LLDWLHGVNS VVYIIVSAVL LKMCFTVTGL RKAALLIKQL LEKDDIAQAR
FELRSLVSRD TSKLPQPKLV AAAVESVAES IGDGFVAPLF FFLIFGVPGV MAYRVVSTFD
SMVGYRGKYE YLGKFAARFD DVLNFIPARL SALCILIASL FGRYSPAGAW RIMWRDHAKT
QSPNAGWPMA TAAGALEVCL EKVGHYSLGD NIRELVPQTI SRSLLLINSA AFIWVLISAG
VIYFVRIA
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