Gene DET0678 details

Gene Information

• Locus tag: DET0678
• Symbol: tkt-2
• ID: 3230020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 625713
• End bp: 627713
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637120243
• Product: transketolase
• Protein accession: YP_181420
• Protein GI: 57234552
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAATA CAAAATCAGA TAGTTTATGT ATAAATGCCC TGCGCTTTCT TGCGGTAGAC 
GCCGTTCAGA AGGCAAATTC GGGGCATCCC GGAGCACCTA TGGGTATGGC CGCTATGGCC 
TATGCCCTGT GGCAAAATTT CCTCAAGCAT AACCCCCAAG ACCCGGCCTG GCCTAACCGT 
GACCGTTTCA TACTTTCTGC CGGCCATGCC TCAGCCTTGC TTTACTCACT TCTCCACCTT 
ACCGGTTATG ATTTGCCGCT GGATGAGCTT AAAAATTTCC GCCAGTGGGG CAGTAAAACC 
CCGGGGCACC CGGAATACGG CCTGACCCCC GGCGTTGAGA TGACTACCGG CCCGCTTGGG 
CAGGGTTTTG CCAGCGGTGT GGGTATGGCT ATGGCCGAAG CCCATCTGGC CGCGGTTTTT 
AACCAGCCGG ATTGCAAAAT AATAGACCAT TATACCTACG GCATAGTCTC TGACGGGGAT 
TTGATGGAGG GCGTAGCCTC GGAAGCCGCC TCTTTGGCGG GGCATTTGGC ACTGGGTAAG 
CTGATTTACC TGTATGACGA TAATGAAATA TCTATTGAAG GTTCAACAGA GCTGGCTTTT 
ACCGAAAATA CGGCTCTGCG TTTTGAAAGT TACGGCTGGC AGGTAATTGG CCCGGTAGAC 
GGGCTTAACC CTGAGGCAGT TTCAGGGGCT ATCAAAGAAG CCCAGTCAGA TTCCGCCCGC 
CCCAGCCTGA TTATCTGTAA AACAGTTATC GGTTTTGGCA GCCCGAACAA GGCCGGCAAG 
GCCTCTGCCC ATGGTGAGCC GCTGGGAACA GACGAAGTGG CCAAAAGCCG CAAATCTTTA 
GGGTGGGATT ACGAGCCTTT TGTAATACCG CCTGAAGCTC TGGCGGAATT CCGCATGGCA 
CTGGATAAAG GCAAAACAGC CCAGCAGGTT TGGCAATCCA AGCTGGACTA CTATTCAAGC 
CGTTATCCCG AAAAAGCCGC CCTTTTGCAG GACAGGCTTT CTGGTAAGCT GCCAGACAAC 
TGGGATAATG AGCTGGATAA ACTTTTTGAC AAGGCTATGG CCAGCCGCGA GGCTTCCGGT 
TTGATTATAA ATACACTGGC TTCCCGCCTG CCAGCCCTTA TGGGCGGTTC GGCAGACCTC 
AGCCCGTCTA ACAAAACTGT TATCAAAGAC GGCGGCGAAT ATGAACCGCC GCATTATGAG 
GGGCGGAATA TCCATTTCGG CGTACGTGAA CACGCCATGG GAGCAATAGC CAACGGGCTG 
GCTCTCCACG GCGGGATTAT ACCTTATGTT GCCACTTTCC TTATATTTTA TGATTACATG 
CGTCCGGCGG TAAGGCTGGC ATCCCTTATG GGTCAAAGGG TTATTTATAT TTTTACCCAT 
GACTCTATCG GTCTGGGAGA GGACGGCCCT ACCCACCAGC CTATTGAACA GCTGGCCGGT 
TTACGTTCGG TGCCCGGTCT GGTTACTATC CGCCCGGCAG ATTCGTATGA AACAGCCCAG 
GCATGGAAAA CGGCCATACT CCGCAAGGAC GGCCCGACCG CCATTGCCCT CTCCCGCCAG 
AAACTGCCTC TCTTAGATAA CTCACAGGCA AATTCCGTAA ACTTGGCCAA AGGGGCATAT 
ATACTGGCAG AAACAGATTC CCGCCCGCAG GTTGCCCTGG TAGCCAGCGG CTCAGAAGTA 
AGCATAGCCG TTCAGGCGGC TGAAATACTT AAAAATAAAG GCGTCTCGTC AAGGGTAGTA 
TCCTTCCCTT CGTGGCAGCT TTTTGAGGCC CAACCCCGGA CCTACCGCCA GAGCATCTTG 
CCCGCTTCCC TGCCGCGGGT AATAATAGAA GCCGGCAGTG CACAGGGATG GTGCAAATAT 
TTGGGCGCAA ACGGTGATAT TATTTCCATT GACCATTTCG GGGCATCAGC CCCGGCGCCT 
GTGCTTTACC AACACTTTGG GCTAACCCCG GAAAATATGG CTGAAAAGGC TTTAAAGCTT 
TTGGAGAATG AAGATGAGTA A 

 

Protein sequence

MSNTKSDSLC INALRFLAVD AVQKANSGHP GAPMGMAAMA YALWQNFLKH NPQDPAWPNR 
DRFILSAGHA SALLYSLLHL TGYDLPLDEL KNFRQWGSKT PGHPEYGLTP GVEMTTGPLG 
QGFASGVGMA MAEAHLAAVF NQPDCKIIDH YTYGIVSDGD LMEGVASEAA SLAGHLALGK 
LIYLYDDNEI SIEGSTELAF TENTALRFES YGWQVIGPVD GLNPEAVSGA IKEAQSDSAR 
PSLIICKTVI GFGSPNKAGK ASAHGEPLGT DEVAKSRKSL GWDYEPFVIP PEALAEFRMA 
LDKGKTAQQV WQSKLDYYSS RYPEKAALLQ DRLSGKLPDN WDNELDKLFD KAMASREASG 
LIINTLASRL PALMGGSADL SPSNKTVIKD GGEYEPPHYE GRNIHFGVRE HAMGAIANGL 
ALHGGIIPYV ATFLIFYDYM RPAVRLASLM GQRVIYIFTH DSIGLGEDGP THQPIEQLAG 
LRSVPGLVTI RPADSYETAQ AWKTAILRKD GPTAIALSRQ KLPLLDNSQA NSVNLAKGAY 
ILAETDSRPQ VALVASGSEV SIAVQAAEIL KNKGVSSRVV SFPSWQLFEA QPRTYRQSIL 
PASLPRVIIE AGSAQGWCKY LGANGDIISI DHFGASAPAP VLYQHFGLTP ENMAEKALKL 
LENEDE