Gene DET0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0657 
SymbolcobT-1 
ID3230057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp605751 
End bp606809 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content53% 
IMG OID637120222 
Productnicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_181399 
Protein GI57234589 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00493685 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAT TAAATGCAAC ACTGGCAAAG ATACACGGGC TTGATAAAGA GGCCATGACC 
AAGGCTCAGG CCCATCAGGA TATCCTGACT AAACCACAGG GTTCTTTAGG CAAGCTGGAA
GCCATTGCGG TTCAGCTTGC AGGCATTCAG GGGAATGCTA AGCCCCAAAC TGCCCGCAAA
GCCATTATCA CCATGGCTGG CGACCACGGT ATTATTGATG AAAAGTTTCA CAACTGGCCC
AAAGAAGTAA CCGCCCAGAT GCTGCAAAAT TTCGCCCATG GCGGTGCCGC CATAAATGTC
CTTTCCAGAC AGGTGGGGGC GCGTAATGTG GTGGTTGCTT TGGGGGTGGC CACCCCCATG
GCGGAAGACC CGAATATAAT CAACCGCAAT ATTGCCCCCG GTACCAATAA CATGGTTTAC
GGTCCGGCTA TGACCCGCGA GCAGGCGGTA AAAGCTATTG AAACAGGTAT AGAGATTGTA
AACGCCGAGG TTAAAAAGGG GCTGGATTTG GTAGGTACCG GTGATATGGG TATCGGCAAT
ACTTCCCCTT CCGCCGCTAT CTGCTCTGTC ATTACCGGGC GGTCACTTGA AGAGGTAACC
GGGCGGGGTA CCGGTGCGTC AGACGAGCAG ATGAAGCTGA AACGCAATGC CATTGCCAAG
GCAATTGCCC TTAACAAACC CAATGCCCAA GATGCGCTGG ATGTGCTGTC CAAGGTGGGC
GGCTATGAAA TAGGCGGTCT GGCAGGAGTA ATACTGGGTG CGGCAGCCAA CAGAGTGGGG
GTGGTTGTAG ACGGCTTTAT TTCAGGTGCG GCGGCACTTA TTGCGTATAC TATCTGCCCG
CAGGCAAAGG ACTTTATGTT TGCCGCTCAC CAGTCGGTAG AGCCGGGACA CCGTATTTTG
CTTGAACACA TGGGGCTGGA TGCTATTTTG AAAATGGATA TGCGGCTGGG TGAAGGCACT
GGTGCCGCCC TTGCCATGAA TATTATCGAA GCATCCAACC GTATCCAGCA CGAGATGGCC
TCTTTTGCAG ATGCCGGGGT TTCCGAAAAG CAAAGTTAG
 
Protein sequence
MELLNATLAK IHGLDKEAMT KAQAHQDILT KPQGSLGKLE AIAVQLAGIQ GNAKPQTARK 
AIITMAGDHG IIDEKFHNWP KEVTAQMLQN FAHGGAAINV LSRQVGARNV VVALGVATPM
AEDPNIINRN IAPGTNNMVY GPAMTREQAV KAIETGIEIV NAEVKKGLDL VGTGDMGIGN
TSPSAAICSV ITGRSLEEVT GRGTGASDEQ MKLKRNAIAK AIALNKPNAQ DALDVLSKVG
GYEIGGLAGV ILGAAANRVG VVVDGFISGA AALIAYTICP QAKDFMFAAH QSVEPGHRIL
LEHMGLDAIL KMDMRLGEGT GAALAMNIIE ASNRIQHEMA SFADAGVSEK QS