Gene DET0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0643 
Symbol 
ID3230086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp594251 
End bp594709 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content52% 
IMG OID637120208 
Productribose-5-phosphate isomerase B 
Protein accessionYP_181385 
Protein GI57234618 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA TCTCTGTTGC CATCGGGGCA GACCACGGCG GTTACGGCCT GAAAACAGAC 
CTCTTACCCT TTTTAAATCA ATTGGGGATA AAGGTGCTGG ATTTGGGGGC ATGTACCTAT 
GATAGTGCTG ATGACTATCC TGATTTTGCT TTAGCGGTGG CCCGAAAGGT TGCCTGCGGG 
CAGACAGACC GCGGCATTAT CATCTGCGGC AGCGGGGTGG GCGCCTGTAT CACCGCCAAT 
AAAATCAAAG GCGTCAGGGC CGGCCTCTGC CACGATGTTT ACTCCGCCCA CCAGGGGGTG 
GAGCATGATG ATATGAACGT GCTTTGTTTA GGGGCCAGGG TAATAGGCAT TGAAGTAGCC 
AAAGAGATTA TTACGGCCTT TTTAAATGCC CGCTTTACCG GCGAAGAACG GCACAAACGC 
CGCCTGGAAA AGCTGCTTCA GGCTGAAAAA GAGGGCTAA
 
Protein sequence
MSNISVAIGA DHGGYGLKTD LLPFLNQLGI KVLDLGACTY DSADDYPDFA LAVARKVACG 
QTDRGIIICG SGVGACITAN KIKGVRAGLC HDVYSAHQGV EHDDMNVLCL GARVIGIEVA 
KEIITAFLNA RFTGEERHKR RLEKLLQAEK EG