Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0640 |
Symbol | |
ID | 3229988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 592044 |
End bp | 592907 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637120205 |
Product | universal stress protein |
Protein accession | YP_181382 |
Protein GI | 57234520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0172387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTTA AGCGCATACT GGTTGCTCTT GATGGGACAA AAACTGCTGA AAAAACCCTG CCCATAGCTG AATGTATGGC TGGGGCTGCC GAAACACAAC TCCTGCTGGT AAGTATATGT GACCCCAAAC CCAAAATCAC CGATGAGCGC CAGAAGTATT TGGATATCAA AGCGGCTGAG TTGCAGGCAA AAGGCATTAA ATCCAGCGGA AAAATGTTTT GCGGTGAACT GCTGCCGCTC ATTTTGAAGT GTATAAGGGA TAATGATATT GACCTGCTGT GTGTGGCTTC TCATGGATAT ACCGGTATTA AGAAAATGGT ACTGGGCAGC GTTTCCGAAA AGCTTATTAA ATCTACCAAT CTGCCGGTTT TGCTGGTAAA AGATGGGTAC GACGCAGACA AGGCAGCTTT CGGGAATATT TTATTGCCAC TGGATGGCTC TCTTTTTTCA GAGGCTTGTC TGAAGCAGGT ATCAGTTCTG GCCCGTGATT TTAAAAGCAA ACTTACCCTG CTGGTGGTTA TTCAGCCCCC CTGCATACCC TCAGATCGTT CCCCCAGTAT TCAACCCAGC TGGGATGAAT ACTATCAGGC GCTTCTGGAG GAGCTTAAAC AACAGGCGCA GGCCTATCTG GAGCGGCTTA CCGGCGAATT GCGGGAAAAT GGAATTGAAA CTGAATTCCG TATGGAAGTT TCAGATAATA TTCCTGAAAC TATTTTGAGT ACCGCCGAAG ATATAAATGC CTCTCTTATT TCATTTACCA CCCATAACCG CTCCGGAATA GAGAAATGGT ATTATGGAAG TGTGGCAGCC GGTTTGATTG AAAATTCCCC GCGCCCCATG CTGTTATGGC GGAACAGCAT TTAA
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Protein sequence | MYFKRILVAL DGTKTAEKTL PIAECMAGAA ETQLLLVSIC DPKPKITDER QKYLDIKAAE LQAKGIKSSG KMFCGELLPL ILKCIRDNDI DLLCVASHGY TGIKKMVLGS VSEKLIKSTN LPVLLVKDGY DADKAAFGNI LLPLDGSLFS EACLKQVSVL ARDFKSKLTL LVVIQPPCIP SDRSPSIQPS WDEYYQALLE ELKQQAQAYL ERLTGELREN GIETEFRMEV SDNIPETILS TAEDINASLI SFTTHNRSGI EKWYYGSVAA GLIENSPRPM LLWRNSI
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