Gene DET0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0625 
Symbol 
ID3230016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp577937 
End bp580498 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content45% 
IMG OID637120190 
Productsensory box sensor histidine kinase 
Protein accessionYP_181367 
Protein GI57234548 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0137493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGACC AATATAAATC CTGCCGCACC AATGCAGAGC AAAGCGTTTT GCCCGAAAGT 
GCCTGCCTGG CCGAGATACT TTCCATGATA GAAAGTACCC GAACTATGGC ATTTATATTT
GAAACCTCCT CCCCATTCCG CTTGATTTAT GCCAGTTCAA ATACACCCGC TCTAAGCGGC
TATTTGCCTG CTGATTATCT GTCTAACCCT GCTTTGTTAG ATGAAATATT GAAACCCGCT
GGTTTAAACC TTGATACCCA AACACCCAAA CAATTTAAAA CACCCCTGGG CCCTATACCC
TGCTATATCC CCAGCAAAAC TGGATTACCC CTCTCAGGTG AATTGTTATG TAAACTTTAT
TCGGGCAAAC TAATCTGCCT TATACACTGT CACGGCCAGG TGCAGAATAA CCCCAATCAA
CTGGCCTTTT TTGATGAAGC CCCTACCCTT ATGCCGCTGA TAATAGGTTT TGAACCGGAC
GGCAAACTAT TATTTGCCAA CCGGATATTT GAGGAAGCAA CCGGTTATCC GGCAAGTGAA
ATAAGCGGTG ATAAATGGCA GTCCTGCGGG CTGTTTAGTG AGGAGGCAAG GGAGCGTATT
GCCCAAATGC TCCAGAACAG CCAAAATGAC AGTATTCAGC CCTTTGAAAT CCGCCTGATA
CATAAAAATG GCCAGACTTG CTGGCTTTCC GGCCACAGCC AGATAATAAA CCCGGGTACT
GTTTCCCCAT ACTTGCAGCT CTCTGCCAGA GATATCACCA TCTGCAAAAA GTCTGAAAAA
ATGCTCCTGC TAACCAGATT TGCGGTAGAA AGGGCTACAG ATGCAATATT CTGGACTGAT
GCCGGGGGTA AATTTGTAGA TGTAAATCAA TCAGCCTGTG ACTCACTTGG CTACCAGCGC
GAAGACCTGC TCAAATTAAA AGTTACTGAT ATAGATACCC TCATAACCAG CCAGACGGAT
TGGGAAAAAC ATTGGGAAAA GCTGAAAGCC CGTACTTACC TGCACTTTGA ATCTGTTCAC
CGGAATATAC AGGGCGGCAG TATTCCAGTG GAAATAACCG CCAATTATCT TCAGTACGAC
AAGATGGAAT ACAACATAGC CATAGTCCGG AATATCCGCC AGCGCAAAGA AGCCGAAAAG
CATCTAAAGT TCACCTCTTT CTCAATGGAA CATTCGGCAG ATCTTATAAT ATGGGTAAAT
CAGAACGGCA ATATCATAGG TGCCAACCGC TCAGCCTACC AGTCACTGGG CTACACCCAT
GACGAGCTAT GCAGTTTAAC CGTAGAGGAT ATAAACCCTG TCTGCACTCC GGAAAGGTGG
AAGACCCTCT GGGGCAGACT AAAGCATGAT ATAAAATATG CTATGGAAAC TGCCCTGATT
ACTAAAAACG GTCAGAAACT ACCTATTGAC GTGATGTGCA ATTTCCTGGA GTTTGAGGGA
GTTGATTATT GCTGTGCAGT AGTGAGGAAT ATAACCGAAC GCAAGAATGT ATATGCCAAG
TTGCTACATG CCGCCGAGGA ATGGCGAATC ACCTTTGATA ATATATCCGA AATAGTGTTT
CTGCTGGATA ATGATTTTAA TATCCAGCGG GCAAACCGGG CTTTTGCCAA AGCTTTGAAC
TGCCAGCCGC AAGAAATCTT AAACAAGAAA TGCTACGAGG TGCTGCACCA CACCAATTGC
CCTCAAGTAA ACTGCCCCAA GTTAGTAGCT TCCGATACCC AAAAGACCCA GTATATAAAT
TACTTTGAAG AAACTATTGA GAAGCATTTT CAGGAAACCA TTGACCCCAT TCTGGATACA
GACGGGCAAT CTCTGGGAAC TGTCCATATC CTAAAAGACC TCACTGAGCA CCATAAAATG
GCCGCCCAGC TGATGATAAC GGATAGACTG GCTTCGGTAG GTGAAATGGC CGCCGGGCTT
GCTCATGAAC TTAATAACCC CCTGACCAGC GTTATAGGAT TTTCCGAACT CCTTCAGGAA
AAAAAACTGC CCGAAGACCT GCAGCGTGAT ATCCAGATAA TAAGCCAGGA AGCCCTGCGG
GCAGCCGAAG TAATCCGCAA TCTGCTGGCA TTTGCCCGCC GCCATGAACC ATCTAAAGAC
TGGGTGGATA TGAATGTGCT AATCCACAAA GTGCTTGATA TCTGCAACTA CGAACAAAGG
GTAAACAATA TTCATATAGT TACCAATCTG GATGCAGATC TGCCGGAAAT AAAAGCGGAC
TATTTTCAGA TGCAGCAGGT ACTTTTGAAT ATAATTATAA ATGCCGAATA TTTCATAACC
AAGGCACACG GTGAGGGTAC TATAGTTATC TCCAGTTCCC GATTCGGAGA TAATATCCGG
ATATCTATTA AGGACGATGG TCCGGGCATG TCTGAAAACG TCTTAAATCG TATATTTGAC
CCGTTTTTCA CTACTAAAGA AGTAGGCAAA GGTACGGGGT TAGGATTATC CATCGGACAT
GGTATAATCA CCCAGCATGG TGGTAAACTG TACGCAGAAA GTTCCGAAGG TAAGGGCGCT
ACCTTTTTTA TAGAGCTTCC AATCAACCCG CCAGCCCAAT AA
 
Protein sequence
MQDQYKSCRT NAEQSVLPES ACLAEILSMI ESTRTMAFIF ETSSPFRLIY ASSNTPALSG 
YLPADYLSNP ALLDEILKPA GLNLDTQTPK QFKTPLGPIP CYIPSKTGLP LSGELLCKLY
SGKLICLIHC HGQVQNNPNQ LAFFDEAPTL MPLIIGFEPD GKLLFANRIF EEATGYPASE
ISGDKWQSCG LFSEEARERI AQMLQNSQND SIQPFEIRLI HKNGQTCWLS GHSQIINPGT
VSPYLQLSAR DITICKKSEK MLLLTRFAVE RATDAIFWTD AGGKFVDVNQ SACDSLGYQR
EDLLKLKVTD IDTLITSQTD WEKHWEKLKA RTYLHFESVH RNIQGGSIPV EITANYLQYD
KMEYNIAIVR NIRQRKEAEK HLKFTSFSME HSADLIIWVN QNGNIIGANR SAYQSLGYTH
DELCSLTVED INPVCTPERW KTLWGRLKHD IKYAMETALI TKNGQKLPID VMCNFLEFEG
VDYCCAVVRN ITERKNVYAK LLHAAEEWRI TFDNISEIVF LLDNDFNIQR ANRAFAKALN
CQPQEILNKK CYEVLHHTNC PQVNCPKLVA SDTQKTQYIN YFEETIEKHF QETIDPILDT
DGQSLGTVHI LKDLTEHHKM AAQLMITDRL ASVGEMAAGL AHELNNPLTS VIGFSELLQE
KKLPEDLQRD IQIISQEALR AAEVIRNLLA FARRHEPSKD WVDMNVLIHK VLDICNYEQR
VNNIHIVTNL DADLPEIKAD YFQMQQVLLN IIINAEYFIT KAHGEGTIVI SSSRFGDNIR
ISIKDDGPGM SENVLNRIFD PFFTTKEVGK GTGLGLSIGH GIITQHGGKL YAESSEGKGA
TFFIELPINP PAQ