| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0623 |
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| Symbol | nrd-3 |
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| ID | 3230018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 575110 |
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| End bp | 576909 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120188 |
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| Product | ribonucleotide reductase |
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| Protein accession | YP_181365 |
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| Protein GI | 57234550 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.136871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAG AATTCGGCAG GCAATCAGTT CTGGCAGATG TACGCTTATC TACTACCGCC
AAGAGGGTAC TAGAAAAACG TTATCTAAAG AAAGATGCCA ACGGGCGGGT GATTGAAACG
CCGGAGGATA TGTTTCGCCG GGTTGCCAGA GTAGTGGCAT CTGCCGAATG CAAATATGCA
CCAGGGGCGG ATACCAGCCG GATAGAAGAT GAATTTTATC AGGCTATGTC CCGCCTGGAG
TTTCTGCCGA ATTCGCCCAC TCTGTTAAAT GCCGGGCGGC AGGTGGGGCA GCTTTCGGCC
TGTTTTGTAC TGCCGGTAGA GGATTCTATT GAGTCTATTT TTGATGCGGT CAAGCAGACA
GCTCTTATTC ATAAAAGCGG GGGCGGTACC GGATTTTCCT TTTCAAATCT CAGGCCTGCC
GGAGACAAAG TAGGGGAATT AACAGAAGTA GCCGGAGGGC CGGTTTCTGT CATAAACATA
TTTTCCGCAG CAGCAGATTA TGTGCGCCAG GGCGGGGTAC GCCGCGGGTG TAATGCCGCT
ATTTTAGACG TAACCCATCC TGATATTCTC AAGTTTATAT CCTGCAAGGG TGACCCTAAT
GCACTGACCA ATTTCTACAT TTCGGTTGTG GTCACCAGAG AGTTTATGAC TAAAGTCCGC
AGCGGTGAAG ATTACGATAT TATCAACCCT CATACCGGCG AAGTAGTCCA GCGGCTCAAT
GCCGCCTGTG TGTTTGACTG TATTGTGGAC CAGGCCTGGA AAACAGGTGA CCCCGGTCTG
GTATTTATAG ACCGGATAAA TGATGATAAC CCCACCCCGG AATTAGGCCG TATCAGGCAT
GTGAGCGGCT GTGGTGAGCA GACCCTTTTG CCGTATGAAT CCTGCAATCT GGGTTCAATC
TCCCTGCCCC GTATGCTTAA GCGTGACGGT GAGAGGGTAG TAGTAGACTA TGAAAAACTG
GGACGGACAG TCAAAATGGC TATCCGCTTT TTGGATAATG TAATAGATGT AAATAGATTC
CCCACCCCTG AGATTGAAAA AGCCACCTTG CGTAACCGCA AGATAGGCTT GGGGGTGATG
GGCTTTGCCG ATATGCTGGT TTTGATGGGT ATACCATATA ATTCCGAAGA GGCTATATTT
CAGGCTGACC AGATAATGGA GTTTATCAAG GAAACCTCCC ACCGTGCTTC GTCCAAACTG
GCCGAAGCCA GAGGCTCTTT CCCTGCTTAT GAGGGCAGTA TTTATGACGT ACCCGGCGGA
CGCCCCATGA GGAACGCCAC CTGTACCAGT ATAGCCCCCA CCGGCACCCT TTCCATTATC
GCCGGGGTTT CTTCGGGCAT AGAGCCTTCT TTCGCTATGG TATTCGTCAG GAATATTCTG
GATGGTGAAA ATCTGCTGGA GATAAACCCC TATTTTGAGG AAATGGCCAG ACGTGAGGGT
TTTCATTCCA AAGAGCTGTT TGAAAAGCTG GTTTCGTCAA ACCATCTGCA TGATATGGAG
TGTGTGCCGG ACTGGCTGAA ACGGCTGCTG GTTACCGCTC ACCGCATTCG CCCCGAATGG
CATATCCGCA TTCAGGCGGC TTTCCAAAAG TATACTGACA ATGCTGTTTC CAAGACGGTA
AATTTCTCCC ATGAAGCTAC CCGTGAGGAT ATGGCCAATG TGTTTAATCT GGCCTACGAC
AAGGGTCTTA AAGGGATAAC GGTTTACCGT GACGGAAGCC GGGCAGCCCA GCCTTTATGC
ACCAGTGAAT CCGGCGTCAA GCTGGTAGAC CAGTATCTGG ATAACTGCTC TTGCCATTAG
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| Protein sequence | MTVEFGRQSV LADVRLSTTA KRVLEKRYLK KDANGRVIET PEDMFRRVAR VVASAECKYA
PGADTSRIED EFYQAMSRLE FLPNSPTLLN AGRQVGQLSA CFVLPVEDSI ESIFDAVKQT
ALIHKSGGGT GFSFSNLRPA GDKVGELTEV AGGPVSVINI FSAAADYVRQ GGVRRGCNAA
ILDVTHPDIL KFISCKGDPN ALTNFYISVV VTREFMTKVR SGEDYDIINP HTGEVVQRLN
AACVFDCIVD QAWKTGDPGL VFIDRINDDN PTPELGRIRH VSGCGEQTLL PYESCNLGSI
SLPRMLKRDG ERVVVDYEKL GRTVKMAIRF LDNVIDVNRF PTPEIEKATL RNRKIGLGVM
GFADMLVLMG IPYNSEEAIF QADQIMEFIK ETSHRASSKL AEARGSFPAY EGSIYDVPGG
RPMRNATCTS IAPTGTLSII AGVSSGIEPS FAMVFVRNIL DGENLLEINP YFEEMARREG
FHSKELFEKL VSSNHLHDME CVPDWLKRLL VTAHRIRPEW HIRIQAAFQK YTDNAVSKTV
NFSHEATRED MANVFNLAYD KGLKGITVYR DGSRAAQPLC TSESGVKLVD QYLDNCSCH
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