| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0578 |
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| Symbol | lysS |
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| ID | 3230107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 530455 |
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| End bp | 531951 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637120143 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_181320 |
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| Protein GI | 57234639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.873191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAG AATATCTGAA CGCCCAAAAG ATGGAAAAAC TGGAACGGAT AAAGAGCCGG
GGTATAAACC CCTATCCAGC CACTTTCCAC CCCAGCCATA CCAGTGTCCA GGCAGTTGCC
TTGCTGGCCG AACTGGAAAA ACAGGAGAAC CCGCCAAAGG AAATTCTGAG GATTGCCGGG
CGGATTATGA CCCTGCGCGA CATGGGCAAG ATTTCTTTCA TGGATATACG TGACGGCAGC
GGCAAAATAC AGGTTTTCTG CCGCCAGAAT GACCTTGACG AAGCCAGTAT AGAGCTGCTT
AAAGATTTGG ATTTGGGTGA TTTTATAGGT GCGGAGGGAA GCCTTATGCG TACCCGCACC
GGTGAACCCA GTCTGGCAGC CACCAAAATA AGCCTGCTTT CCAAATCCCT GCTGCCCCTG
CCTGAGAAAT GGCACGGCCT GCAGGATGTG GAAAAACGCT ACCGCCAGCG TTACCTGGAC
CTTATTTCCA ATGCGGACGC CCGCCAGACC TTCCTTACCC GCAGCCAGGT TATCAGTGCC
ATCCGCAGCT TTATGAGCAG CAAAGGTTTT CTGGAGGTAG AAACCCCGGT TCTTCAGCCT
GAGGCAGGCG GGGCACTCGC CCGCCCCTTT ATTACCCATC ATCAGGCTTT GGACTGTGAT
TTTTATATGC GGATAGCTTT GGAACTGCAC CTGAAAAGGC TGATTGTGGG CGGCTTTGAC
CGGGTATATG AGATAGGGCG GATATTCCGC AACGAAGGGG TTTCCACCCG CCACAACCCC
GAATTTACCA TGATGGAAAG CTACCAGGCT TATGCTGACT ATAAAGACGT TATGGATTTC
CTTGAGGAAA TGGTTTCAAG TGTGGTTAAA GAAATAAGCG GCGGATACAC CGTGCCATTC
GGGGATACTA CACTGGATTT TACCCCTCCC TGGCCCCGCC TGAGCATGCG TGATGCCGTA
AAGCAATATG CCGGTATAGA TTTCTTTGAT TTCCCCACCA AAGAGGCTTT AGCCGCAGAG
ATGATTCGCC GCAAACTGAA GGTAGACCCC GCCAAAGACT GGGGCAAACT GGTTGATGAG
CTGGTGGGTG AATTTGTAGA ACCCCGTTTG ATTCAACCCA CTTTCCTTAC TGACCACCCG
GTGGCCATGT CCCCGCTTGC CAAACAGAAG CCGGAAGACC CCCGCCTGAC AGAGCGGTTT
GAAGCCATTT GTGCCAATAT GGAAATAGCC AATGCCTTTT CCGAACTGAA TGACCCGGTA
GAGCAAAGGG CGCGTTTTAA GGAACAGCTG GAAAAGCGCA ATCAACTGCG TACGGAAGAG
TCCGAAAGTA TAGACGAGGA CTTTTTGGCC GCTCTGGCAT ATGGTATGCC GCCCACCGGC
GGTCTGGGTG TAGGTATTGA CCGTCTGGTA ATGCTGCTTA CCAACCATGA CTCTATCCGT
GAGGTTATTT TGTTCCCTGC CCTGAAAGAC CGGGAAGACA AGGGCGAACA GGAATAA
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| Protein sequence | MPEEYLNAQK MEKLERIKSR GINPYPATFH PSHTSVQAVA LLAELEKQEN PPKEILRIAG
RIMTLRDMGK ISFMDIRDGS GKIQVFCRQN DLDEASIELL KDLDLGDFIG AEGSLMRTRT
GEPSLAATKI SLLSKSLLPL PEKWHGLQDV EKRYRQRYLD LISNADARQT FLTRSQVISA
IRSFMSSKGF LEVETPVLQP EAGGALARPF ITHHQALDCD FYMRIALELH LKRLIVGGFD
RVYEIGRIFR NEGVSTRHNP EFTMMESYQA YADYKDVMDF LEEMVSSVVK EISGGYTVPF
GDTTLDFTPP WPRLSMRDAV KQYAGIDFFD FPTKEALAAE MIRRKLKVDP AKDWGKLVDE
LVGEFVEPRL IQPTFLTDHP VAMSPLAKQK PEDPRLTERF EAICANMEIA NAFSELNDPV
EQRARFKEQL EKRNQLRTEE SESIDEDFLA ALAYGMPPTG GLGVGIDRLV MLLTNHDSIR
EVILFPALKD REDKGEQE
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