Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0572 |
Symbol | |
ID | 3230120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 524903 |
End bp | 525571 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637120137 |
Product | RadC family DNA repair protein |
Protein accession | YP_181315 |
Protein GI | 57234651 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.611512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATT TGCCGCTGGC CGAAAGACCC AGAGAAAGGC TTCAGTCTTT GGGGGCAGGG GTGCTTTCCT CAGCCGAACT TCTGGCGGTT ATTTTGGGGC GGGGAGTAGC GGGTGAACCG GTTTTACAGA GCGCTCAGCG CCTGCTTACC CACTTCGGCG GTCCGTCAGG CATAGCCTCG GCCAGCGTGG AGGAACTTTT AAAACTGAAA GGCATAGGTC TGGCCAAAGC CTGCCAGCTG AAGGCTGCTT TTGAACTGGC TAAACGGGCA GGCGGGATTA AAGCCGAATA CCAGCCCTGC ATCAAAACCC CGGAAGACGT TTTTCAAATA ATATACCCGC TGGTCTGTGA CGAAAAAAAG GAACATTTTT TCTGCCTGAT GCTGGATGTC AAAAGTAAGC TTATCCGGGT AGGGCATATA TCTGCCGGCA GCCTGGATGA GAGTGTGGTG CATCCGCGCG AAGTCTTTAA AGAAGCACTT TCCGCCAGTG CCGCAACCGT AATACTGGCA CACAACCATC CCTCCGGGGA AAGTGAACCC TCGCCGGATG ATATCGGCCT GTCCGCCCGC CTAAGAGAGG CCGGGGGTAT AATGGGGATA GAAGTGCTTG ACCATGTAAT AATAGGCGGA CAAACTTTTA CCAGTTTAAA AAGACAGGGG CTTTTATAA
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Protein sequence | MRDLPLAERP RERLQSLGAG VLSSAELLAV ILGRGVAGEP VLQSAQRLLT HFGGPSGIAS ASVEELLKLK GIGLAKACQL KAAFELAKRA GGIKAEYQPC IKTPEDVFQI IYPLVCDEKK EHFFCLMLDV KSKLIRVGHI SAGSLDESVV HPREVFKEAL SASAATVILA HNHPSGESEP SPDDIGLSAR LREAGGIMGI EVLDHVIIGG QTFTSLKRQG LL
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