| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0564 |
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| Symbol | atpD |
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| ID | 3230136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 518663 |
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| End bp | 520057 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120129 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_181307 |
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| Protein GI | 57234667 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.257197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACG GAAAGGTTAT ACAGGTAATT GGTTCGGTTG TTGACGTAGA GTTCTCGGCA
GATTCCATGC CGGCTCTGTT TAACGCATTG GAAATTCCCC GTGATAACGG CAAGATGGTG
CTGGAAGTGC AGTCACACGT CGGTAACAAC CGCGTAAAGT GCCTTTCCTT TACTCCTACC
GATGGTCTGG AGCGCGGCGC CGAGGTTATA GATACCAAAA GGCCGCTTTC AGTTCCGGTA
GGCCGGAATA CTCTGGGGCG TATCTTTAAC GTGCTGGGTG AACCTCTGGA TAACAGGGGT
GATGTAAAAG CTGAAAAGAC TATGCCTATC CACCGCTCGG CACCAGCTAT GGACGAGCTG
GAATCTTCTG CTCAGGTATT GGAAACAGGT CTTAAAGTTA TCGACCTGAT TGCCCCCTTT
GCCCGCGGCG GTAAGATCGG TGCTTTGGGT GGCGCTGGCG TAGGCAAGAC AGTGCTTATT
CAGGAACTTA TCCGCAATAT TGCTACCGAA CACGAAGGGT TTTCGGTTTT TGCCGGTGTA
GGTGAACGTT CCCGCGAAGG TAATGACCTC TGGCATGAAA TGGAAGACTC CGGCGTGCTT
CCCAAAACTA CCATGGTATT CGGTCAGATG AATGAGCTTC CCGCAGTACG TCTGCGTATT
GCTCTTACCG GCCTTACCAT GGCCGAATAT TTCCGTGACG AAGAAAGACA GGACGTGCTC
CTGTTTATTG ACAATATTTA TCGTTATACT CTGGCCGGTA TGGAAGTATC CGCTCTTCTG
GGGCGTATGC CTTCCGCTGT AGGTTATCAG CCTACTCTGG CTACAGAGAT GGGTGCTCTG
CAGGAACGCA TTGCCTCCAC CAAACAGGGT TCGATTACTT CATTCCAGGC TGTGTATGTA
CCGGCAGATG ACTATACCGA TCCCGGTGTA GTCGCCACCT TCGGTCACCT GGATGCTATG
ATAGCCCTTG AGCGTTCACT GGCTGAACAG GCTCTTTATC CGGCGGTAGA CCCGCTGGCT
TCCAATTCCC GCATACTTGA CCCTCAGGTA GTGGGTGAGG AACACTATCA GGTAGCCCGT
GACGTGCAGA AGGTTCTCCA GCGTTACAAG GACCTGCAGG ACGTTATTGC TATCTTGGGT
ATGGAAGAAC TTTCTGAAGA AGATAAACTC ACAGTTGCCC GTGCCCGCCG TATTCAGCGT
TTCCTGACTC AGCCCATGTT TGTTTCCGAG GTATTTACCG GCCGTCCCGG TCAGTATGTA
TCTCTGGCTG AGACTATCCG CGGGTTCAAG GAAATCCTTG AGGGTAAGCA TGACAGTTTG
CCTGAACAGG CTTTCTATAT GGTAGGCACT ATTGATGATG CCGTAGCCGA AGCTAAAAAG
CTCAGCGCGG CCTAA
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| Protein sequence | MANGKVIQVI GSVVDVEFSA DSMPALFNAL EIPRDNGKMV LEVQSHVGNN RVKCLSFTPT
DGLERGAEVI DTKRPLSVPV GRNTLGRIFN VLGEPLDNRG DVKAEKTMPI HRSAPAMDEL
ESSAQVLETG LKVIDLIAPF ARGGKIGALG GAGVGKTVLI QELIRNIATE HEGFSVFAGV
GERSREGNDL WHEMEDSGVL PKTTMVFGQM NELPAVRLRI ALTGLTMAEY FRDEERQDVL
LFIDNIYRYT LAGMEVSALL GRMPSAVGYQ PTLATEMGAL QERIASTKQG SITSFQAVYV
PADDYTDPGV VATFGHLDAM IALERSLAEQ ALYPAVDPLA SNSRILDPQV VGEEHYQVAR
DVQKVLQRYK DLQDVIAILG MEELSEEDKL TVARARRIQR FLTQPMFVSE VFTGRPGQYV
SLAETIRGFK EILEGKHDSL PEQAFYMVGT IDDAVAEAKK LSAA
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