Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0547 |
Symbol | |
ID | 3230127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 502495 |
End bp | 503046 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120113 |
Product | HDIG domain-containing protein |
Protein accession | YP_181291 |
Protein GI | 57234658 |
COG category | [R] General function prediction only |
COG ID | [COG2316] Predicted hydrolase (HD superfamily) |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAGGC AGCTTGCTTT AGCTGAAGTA GAAAAACGGA TAGAAAATAA AAATCTGGTC AAACATATGC TGGCGGTTGA GGCCGTCATG AAAAGTTTGG CTGCATATTT CGGTGAAAAC GAAGATGAAT GGGCTTTGGC CGGGCTTATA CATGATATAG ACCTGGGTGA AGTAAAAGAC GATATGTCGC TTCACAGCAA ACGCGGTGCC GAAATTGCCG CCGGTTTGGG TGCCAGTGAA GATGTCTGCC GGGCAATTCT GGTGCATAAT TCGGCTCATG GCATCCTTCC TGAAAGCCGT ATGGAAAAAG CTTTGTTCTG CTCTGACCCT ATAACCGGCC TTATTACAGC CGCTGCGTTA GTCAGGCCGG ATAAAAAGCT GGCCTGTGTG GAAGCTAAAA GTGTATCCAA ACGCTTTAAG GAAAAGTCTT TTGCCGCCGG TGCAAACCGG GAACAGATAG CCGCCTGTTC CGATTTGGGT TTGGAACTGG ATGAGTTTAT CCGTATTTCT CTGGGTGCTA TGCAAGCTGT TGCCTCTGAT TTGGGGCTTT AA
|
Protein sequence | MDRQLALAEV EKRIENKNLV KHMLAVEAVM KSLAAYFGEN EDEWALAGLI HDIDLGEVKD DMSLHSKRGA EIAAGLGASE DVCRAILVHN SAHGILPESR MEKALFCSDP ITGLITAAAL VRPDKKLACV EAKSVSKRFK EKSFAAGANR EQIAACSDLG LELDEFIRIS LGAMQAVASD LGL
|
| |