| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0545 |
|---|
| Symbol | |
|---|
| ID | 3230129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 498174 |
|---|
| End bp | 499367 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637120111 |
|---|
| Product | amidohydrolase family protein |
|---|
| Protein accession | YP_181289 |
|---|
| Protein GI | 57234660 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA ACAATCTTGC CAATATCAAA AGTGCTGTTA TTAAAATGAT TGACACTGAA
AAGGGCAGTT TGGAAGAACT GTCTCTTAAG CTGCATGCCA ACCCTGAGCT GGGTTATCAG
GAATACAAAG CAGTGGAATG GCTGTGCGAA TACCTGTCCA GACACAATTT CAGTATTGAA
AGAAATACCG GCGGCCTTAA GACTGCCTTT AAAGCCACTT TCGGTCAGGG TAAACCGGTT
ATAGGTTTTC TGGCTGAATA CGACGCCCTG CCCCAGCTGG GTCATGCCTG CGGCCATAAC
CTTATTGCCA CCGCGGCAGC GGGTGCGGCT GTAGCCGCCC GTCTGGCCGC CAAACTTTAC
GGCGGTACGG TCTGTCTTAT CGGCACTCCG GCTGAAGAGC TTAGCGGCGG TAAAATACAG
ATGGTGGAAA AAGGTGTATT TAAAGAGCTG GAGGCGGCGC TTATAGCCCA CCCCGGCAAT
GATGATATTG CTACCACCCA GGCACTGGCC TGTGTAACAT TAAACGTAGA GTATTTCGGT
AAAGAATCCC ATGCCGCCGC CCACCCGGAC AAAGGCATAA ACGCACTTGA CGCCATAGTA
CTGGCATATA CCAGCCTGAA TTCCCTACGC CAGCACATAG AGCCGGGTGC CCGTATTCAC
GGCATTATTA CCGACGGGGG CAAAGCCGCC AACATTGTAC CCGGGCATTC CGCCGGCACT
TTCCTGATAC GTTCCCAAAC TCTGCCCTAC CTAAGAGAGC TGATGGACAG GGTACTGGAC
TGCTTTAAAT CTGCCGCCCA GGCTACCGGT GCCCGTTTGG AGTACCGCTT TGATAAATCC
ATATATGCCC CCATGAATAA CAACATGGCT CTGGCAAACC TATATGTAAA AAATATGGAT
ATGCTGGGTC ACCGGACTTT GCTTGAAGAC CCTGAGATGA ATTTTGGGAG TACCGATATG
GGCAATGTCA GCCAGGTTGT ACCCAGCCTG CACGGTTATT ATGCCATTAC CGGCAAAGAT
GTCTCCGGCC ATACTCCGGA ATTTGCTTCT GCCGCCTGTT CGGCAAAGGG TATTAAGGGT
GCTTTAGATG CCGCCAAGGC TATGGCTATG ACCGCGGCAG ATTTATTCGG CAGCTCAGCC
AATCTGGAAA AAGTAAAAAC AGAATTTCAA AAATCTACCC GGCCATCCGC CTGA
|
|---|
| Protein sequence | MSDNNLANIK SAVIKMIDTE KGSLEELSLK LHANPELGYQ EYKAVEWLCE YLSRHNFSIE
RNTGGLKTAF KATFGQGKPV IGFLAEYDAL PQLGHACGHN LIATAAAGAA VAARLAAKLY
GGTVCLIGTP AEELSGGKIQ MVEKGVFKEL EAALIAHPGN DDIATTQALA CVTLNVEYFG
KESHAAAHPD KGINALDAIV LAYTSLNSLR QHIEPGARIH GIITDGGKAA NIVPGHSAGT
FLIRSQTLPY LRELMDRVLD CFKSAAQATG ARLEYRFDKS IYAPMNNNMA LANLYVKNMD
MLGHRTLLED PEMNFGSTDM GNVSQVVPSL HGYYAITGKD VSGHTPEFAS AACSAKGIKG
ALDAAKAMAM TAADLFGSSA NLEKVKTEFQ KSTRPSA
|
|---|
| |