| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0542 |
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| Symbol | trxB |
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| ID | 3230132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 495314 |
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| End bp | 496234 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120108 |
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| Product | thioredoxin-disulfide reductase |
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| Protein accession | YP_181286 |
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| Protein GI | 57234663 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACCAC TCCTGTATGA CGTAATAATT ATAGGCGGAG GCCCGGCCGG GCTGACTGCC
GCCCTGTATA CGGGCAGGGC AAAACTGAAG ACACTGGTTA TTGAACGCGC TTTTATAGGC
GGGCAGATAA CCCGTTCGGA AAAAGTGGAT AACTATCCCG GTTTTCCGGA GGGTATCACC
GGCTTTGACC TGACCCAGCA GATGCAAATA CAGGCCGAAA AATACGGGGC GGAGATAATT
TCGGCAGAGG TAACTGCCCT TAATAAAGCC AAAGACAGCT TTGAACTTAG CACCGAAGCG
GGCAAACTAA GCGGGCGTTG TATTATTATC TGCGGAGGTA CCGAACGCAA CAAGCTGGGC
GTTCCCGGCG AAGAGGAGTT TTCAGGCCGG GGCGTTTCCT ACTGCGCCAC CTGTGATGCC
CCTTTTTACA ATGACAAGGT TGTGGCGGCG GTAGGCGGGG GAAACATGGC AATTTACGAA
GCCCTGCACC TGTCAGAGTT TGCAAAAAAA GTTTACCTGA TTCACCGCCG CCAGGGTTTC
CGGGCAGATG CGGTATTAGT AGATAAAGCA AAGAGCAAGG GCAATATTGA AATGGTGCTG
GATACGGTGA TTACCTCCAT AAACGGCAAG GACAGCATCC AGTCACTATC ATTAAATAAC
CTTAAAACCC AAAAAACATC TGACCTGCCG GTAAACGGGC TTTTTGTAGC CGTGGGCTTA
CAGCCGAATA CCGCTTATCT GAAGGGTGTG GTGGATATGG ACAAAAACGG CAGCATACTG
GTAAATGACC AGATGGAAAC GTCAGTAAGC GGCATACTCT GTGCCGGGGA TATCCGAAGC
GGCTCAATAA GGCAGGTTAT ATCTGCCGCC GGAGACGGGG CAGTTGCCGC CCTTTCCGCC
AAACGCTATC TTGACCGCTA A
|
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| Protein sequence | MSPLLYDVII IGGGPAGLTA ALYTGRAKLK TLVIERAFIG GQITRSEKVD NYPGFPEGIT
GFDLTQQMQI QAEKYGAEII SAEVTALNKA KDSFELSTEA GKLSGRCIII CGGTERNKLG
VPGEEEFSGR GVSYCATCDA PFYNDKVVAA VGGGNMAIYE ALHLSEFAKK VYLIHRRQGF
RADAVLVDKA KSKGNIEMVL DTVITSINGK DSIQSLSLNN LKTQKTSDLP VNGLFVAVGL
QPNTAYLKGV VDMDKNGSIL VNDQMETSVS GILCAGDIRS GSIRQVISAA GDGAVAALSA
KRYLDR
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