| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0539 |
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| Symbol | |
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| ID | 3230143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 492705 |
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| End bp | 493415 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120105 |
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| Product | DnaD and phage-associated domain-containing protein |
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| Protein accession | YP_181283 |
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| Protein GI | 57234674 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3935] Putative primosome component and related proteins |
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| TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.245634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATG CGCCATTATT CCCCGCCAGA CAGGAGTTTA CCCCCGTATC CCGCTTTTTT
ATCCACCGGG TAGCTCCCCT AATAGAAGAT ATGACCGAAC TGAAGGTAAG CCTGGCGGTA
TTCAGCCTTA TTCAGGCAAA AAAAGGATAC CCCAGATACA CCACGCTGGC TGAACTGGCA
GCCGAAGAAA CCCTGGTAAA AGCCTTGGGC AAAACGCGGG ACGAAAGCCT GCAATCACTG
GATAAAGCCC TCCAAATGGC CGTAAAACGG GGAACCCTGC TGGGGCTGGA AATAAAAAGC
GGCAAACACA CCCACCAGCT TTATTTTGTA AATACCGAAT CAGAAGCGGC AGTGGTGGAA
AAGATAAAAA CCGGCAATCT GGTTTTGCCC GGCTTAAAAG AAGCCTCAAC CGAAGTAATA
AGCGGCCAAG CCGAACAGCC AAATATATTT AAACTTTACG AACAGAATAT AGGCATGCTG
ACCCCCATGC TGGCAGACAA CCTGAAAGAG GCGGAAAAAC TCTACCCCGA AGAATGGATT
GCCGAAGCCA TAAAAGAGGC GGTCAACCTG AATAAACGCA ACTGGCGTTA TATAGAACGA
ATACTGGAAA ATTGGTCAAG TCAGGGAAAA AACAGTGGAA CACATAAAGG ACATACTGGG
GAAACAGATA AATATAAAGG GCAGCTCTTC GACCACCTCG TCCAAAGGTA A
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| Protein sequence | MSNAPLFPAR QEFTPVSRFF IHRVAPLIED MTELKVSLAV FSLIQAKKGY PRYTTLAELA
AEETLVKALG KTRDESLQSL DKALQMAVKR GTLLGLEIKS GKHTHQLYFV NTESEAAVVE
KIKTGNLVLP GLKEASTEVI SGQAEQPNIF KLYEQNIGML TPMLADNLKE AEKLYPEEWI
AEAIKEAVNL NKRNWRYIER ILENWSSQGK NSGTHKGHTG ETDKYKGQLF DHLVQR
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