| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0534 |
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| Symbol | lysA |
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| ID | 3230148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 487604 |
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| End bp | 488908 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637120100 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_181278 |
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| Protein GI | 57234679 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAA GAATACAGGT ATTCCCCAAA AACACTGAAG TAAAAAATAA CCGCCTGGTT
ATCGGCGGTG CAGATGTTGC CGGGCTTTGT GCCAAATACG GCACGCCCCT GTACGTTTTT
GACGAGGCTA CTATCCGCCA GAACTGCCGT GACTTTAAAC GGGAGTTTTC CCGCCGCTAC
GCAGACAGTT CGGTGAGTTA TGCCTCAAAA GCCTTTTTGC ATCCGGCCTT GCTGAAGATA
CTTGCCGAAG AGGGTATGAG TCTGGACGTG GTTTCCGGCG GAGAGCTGTC TATTGCCAGC
AGCGCCGGTT TCCCTATGGA TATGGTCTAT TTCCATGGAA ATAACAAATC TGCTGATGAA
CTAAGGCTGG CGCTCCGTCT GCATGTCGGG CGGATTGTGG TAGACAGCTT TGATGAAATC
AAACTGCTGT CAAAACTGGC GGATGAGAGC GGGCATATTC CGGATATACT CCTCAGGCTT
ACTCCGGGAG TAGATGCCCA TACCCATCAC CATATTACTA CCGGCAAGCT GGATTCCAAA
TTTGGTTTCC CCCTGTTTCA GGCAGCCGAA GCGGTAGGTT TGGCTATGGC GCAGGCCAGT
CTGAATCTGG TCGGTTTCCA TTTCCATATC GGTTCCCAGA TATTTGAAAC CCAGCCCTTC
CTTGATGCTA TAGATTTGGT GCTGGAATTT GCCGCTCAGG TTCAGGAACG CTATGGTTTT
GACATAGAGG AGCTGGATAT CGGCGGCGGT TACGGCGTTC AGTACGAAGT GGATAAACCT
GCACCCCAGG TATCTGTTTA TGCGGAGGCT ATCGGCGCTA AGATTGTCTC CAAGTGCCAC
AGCTTAAAGC TGACTCCCCC CAGCCTTAAT ATTGAACCGG GGCGGGCTGT CATAGCTCAG
GCAGGGGTGG CCTTGTATAC GGTGGGGGTT ATTAAAGATA TTCCCGGTAT CCGGGTGTAT
GCCTCGGTGG ACGGGGGCAT GGGTGATAAT ATCCGCCCGG CTTTGTATGA GGCAAAGTAT
GAGGCGGTGG TGGCAAATAA TGTCCAGTCT TCAGAAAAAC AAAAGGTAAC TGTAGCAGGC
AAGTTTTGCG AATCCGGTGA TATACTTATA ACCGATATTG AGCTGCCTGT CCTCAAGACA
GGTGATATAC TGGCAGTGCC CTGCTGCGGG GCTTACTGTT TGCCTATGTC CAGCAATTAC
AACGGCTATC AGCGCCCGGC TGTAGTGATG CTGAAAAATG GTGAAGACCG CCTGATACGG
CGGCGCGAAA CTGTGGAAGA CCTTAGCCGT CTGGATTCGG TCTAA
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| Protein sequence | MEPRIQVFPK NTEVKNNRLV IGGADVAGLC AKYGTPLYVF DEATIRQNCR DFKREFSRRY
ADSSVSYASK AFLHPALLKI LAEEGMSLDV VSGGELSIAS SAGFPMDMVY FHGNNKSADE
LRLALRLHVG RIVVDSFDEI KLLSKLADES GHIPDILLRL TPGVDAHTHH HITTGKLDSK
FGFPLFQAAE AVGLAMAQAS LNLVGFHFHI GSQIFETQPF LDAIDLVLEF AAQVQERYGF
DIEELDIGGG YGVQYEVDKP APQVSVYAEA IGAKIVSKCH SLKLTPPSLN IEPGRAVIAQ
AGVALYTVGV IKDIPGIRVY ASVDGGMGDN IRPALYEAKY EAVVANNVQS SEKQKVTVAG
KFCESGDILI TDIELPVLKT GDILAVPCCG AYCLPMSSNY NGYQRPAVVM LKNGEDRLIR
RRETVEDLSR LDSV
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