Gene DET0531 details

Gene Information

• Locus tag: DET0531
• Symbol: glmS
• ID: 3230160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 484507
• End bp: 486288
• Gene Length: 1782 bp
• Protein Length: 593 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637120097
• Product: glucosamine--fructose-6-phosphate aminotransferase, isomerizing
• Protein accession: YP_181275
• Protein GI: 57234691
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01134] amidophosphoribosyltransferase; [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.840167
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGTA TAGTGGGTTA CACCGGTAAA CGCCAGGCAC AGGCTGTTTT ATATGATTGT 
TTGTGCCGTC TGGAGTACCG CGGGTATGAT TCCTGCGGCA TAGCCGTAAA CACGCCTGAG 
GTGCAGGTTT TTAAAGATGC AGGCAAAGTC CGTAACATAC TTCAAAATGC CCCCCGGTTT 
GAGGGTACAG CCGGTCTGGG GCATACCCGC TGGGCTACCT GCGGTGAACC AACCCGGATA 
AATGCCCACC CCCACATAGA CTGCACCGGC AAAATCAGCC TGGTGCATAA CGGGGTAATA 
AATAACTATG CCCAACTCCG CAAACGGCTT GAGGCTAATG GCCACAAGGT TGTTTCAGAT 
ACGGACACCG AGCTTATTGC CCATTTGATA GAGGAGTACG ATAAAGGAAA CCTAGAAGAA 
GCCGTCCGTC AGGCAGTGAA GGAGATAGAT GGCTCTTATG CTCTGGTGGT GATGCGTTCC 
GGGGATAATA CCCTGGTAGC GGTGCGGAAG GACAGTCCGC TGGTTATCGG GGTGGGGGAC 
AGTGAGTATC TGGTAGCTTC AGATGTGCCT GCTATTTTAG GATATACCAA CCGGGTTATA 
TATCCGGAAG AGGGGGATAT TGCCGTTATC AGCCCGGACA GCCTGAAAAT AAACCGGAAT 
GGCGAATATA TTATTCCCCG TGTAGAGAAG ATAAACTGGA CGCCGGATGA AGCCCAGAAG 
GGCGGCTACA GCCACTATAT GCTTAAAGAA ATACACGAAC AGCCGCAGGT TATTCAAAAT 
ACCCTGATAA ATATGCCCCT GACGGAGTCT TTTTATAAAT CCCCGCTGCT GGAGCAGGGC 
CGTAAGACCG GCATACTGTT TCTAGCCTGC GGCAGTTCAT ACCATGCGGC TCTGACCGGC 
CGCTATTTGG TAGAGGAACA TCTGAATATA CCCGTCCGTC TGGAGGTGGC TTCAGAGTTC 
AACTATATGC AGCATTTACC GCCCTGCAAA CTGGCCGTGG TGCTTAGCCA GTCTGGCGAA 
ACCGCAGACA TTTTGCGGGC CATGCGCCGT TTAAAGCAAG CCGGTTGTAT GATAGTGGCC 
ATAACAAATG TAGCCGGCAG TACGGCTGCC CGTCTGGCAG ACCATGTTAT ATATACTCAG 
GCTGGGCCGG AAATAGGGGT AGCAGCTACC AAGAGTTTTA TTGCCCAGCT GGTAGTCCTG 
TACGCTTTGT GTTTTGCCTG TGCTTCTGCT GCCAGCCCGC GTTATCAGGA TTATTTAAGC 
ACTATGCGGC TTTTACCCGG TGCTGTCCAG AAAATACTGG GCAGCCACCA GAATATTAAA 
GATGCGGCTA TAGAAGTAGC CAAAGCTAAA AGTGCCTTTT TTATAGGCCG GGGGATTAAC 
TATCCTATTG CCCTGGAGGG TGCTTTGAAG CTAAAGGAGA TTTCGTATAT CCATGCGGAG 
GGCTATGCTG CCGGGGAACT GAAACACGGG CCGTTTGCCC TGCTTTCTCC GGAAACGCCG 
GTGCTGGCGT TGGTTAGCCG TGACCAAACC TATGAAGCCA TGTTGACTGG GCTGCGGGAA 
ATAAAGGTAC GGCGCGCACC TTTGATTGTT ATCGGTGAAG ACGGAGACGA CCAGCTTGAA 
CAGCTGGCAG ACCGGGTGAT AAAAATTCCG CCCTTCAACC GGCTGTTCAG TCCCATACTC 
TTTTCAGTAG TGCTTCAGCT GCTGGCATTT TATGCGGCTT ATGAGCTGGG GCGTGACATA 
GATACCCCCC GCAATCTGGC TAAAAGCGTC ACAGTAGAGT AG 

 

Protein sequence

MCGIVGYTGK RQAQAVLYDC LCRLEYRGYD SCGIAVNTPE VQVFKDAGKV RNILQNAPRF 
EGTAGLGHTR WATCGEPTRI NAHPHIDCTG KISLVHNGVI NNYAQLRKRL EANGHKVVSD 
TDTELIAHLI EEYDKGNLEE AVRQAVKEID GSYALVVMRS GDNTLVAVRK DSPLVIGVGD 
SEYLVASDVP AILGYTNRVI YPEEGDIAVI SPDSLKINRN GEYIIPRVEK INWTPDEAQK 
GGYSHYMLKE IHEQPQVIQN TLINMPLTES FYKSPLLEQG RKTGILFLAC GSSYHAALTG 
RYLVEEHLNI PVRLEVASEF NYMQHLPPCK LAVVLSQSGE TADILRAMRR LKQAGCMIVA 
ITNVAGSTAA RLADHVIYTQ AGPEIGVAAT KSFIAQLVVL YALCFACASA ASPRYQDYLS 
TMRLLPGAVQ KILGSHQNIK DAAIEVAKAK SAFFIGRGIN YPIALEGALK LKEISYIHAE 
GYAAGELKHG PFALLSPETP VLALVSRDQT YEAMLTGLRE IKVRRAPLIV IGEDGDDQLE 
QLADRVIKIP PFNRLFSPIL FSVVLQLLAF YAAYELGRDI DTPRNLAKSV TVE