Gene DET0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0506 
SymbolrpsI 
ID3230209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp461730 
End bp462128 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID637120072 
Product30S ribosomal protein S9 
Protein accessionYP_181250 
Protein GI57234740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000893397 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGAGA AGAATACATA TTTTATCGGT GTTGGTCGGC GTAAGACCGC AGTTGCCACT 
GTCAAACTTA CCAGCGGCAA CGGCGTTATC GTAATTGATG GCAAGCCCAT TGAAGAACGC
TTTACCCGTG TGCAGGAACG CAACGTTATT TTGAATCCCA TGATGGTCAC TGATACTATG
GGCAAGTATA ACGCTGTTAT AAAAGTTCTG GGTGGTGGTG TTGCCGGTCA GAGCGGGGCT
ATTGCTCACG GCATTGCCCG TGCTCTTGAA AAGTCTGACG ATAAGTTGCG CGCTACTCTT
AAGAGCAACG GTCTTCTTAC CCGTGATGAC CGGACTAAAG AGCGCAAGAA GCCCGGTTTG
AAACGTGCCC GCAAAGCTCC CCAGTACACT AAACGTTAA
 
Protein sequence
MVEKNTYFIG VGRRKTAVAT VKLTSGNGVI VIDGKPIEER FTRVQERNVI LNPMMVTDTM 
GKYNAVIKVL GGGVAGQSGA IAHGIARALE KSDDKLRATL KSNGLLTRDD RTKERKKPGL
KRARKAPQYT KR