| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0504 |
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| Symbol | truA |
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| ID | 3230211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 460538 |
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| End bp | 461284 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637120070 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_181248 |
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| Protein GI | 57234742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00170943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTATTGG TAATTGAATA CGAGGGTACC CGGTATTCAG GCTTTCAGGT TCAGGATAAA
GGGGCCACTA TACAGGGAGA GCTGGAAACA GCTATCCGGA AATTAACAAG TGAACAGACC
AGAGTGAGCG GTTCCGGAAG AACTGATGCC GGGGTACACG CGGCTTACCA GGTAGTCAGC
TACCTCTCGG AATCTTCACT GGGATTGGAC AAGATAAAGG GCGGGTTAAA TTTTTACCTG
CCGCCGGACA TAGCCGTAAA AGAAGTCCAC TTCGTAGCTG AAAGCTTTGA TGTGAGACGC
CGGGCTATCA GCCGGGAGTA CTCTTACCAA ATATTAAATA GTAAAACTCG CTCGCCGCTT
GCCAGGCTTC AGGCTTGGCA GGTGCCTTAC AAGCTAGATA TAAAGCTAAT GGAACAGGCT
TTTAAGATGC TTGAAGGGGA GCATGACTTT ATCGCTTTTG CCTCCAGTCT GGGGCCGGAG
ATAAAGAAAA CTGTCCGCCG GGTTAACTGG ACCCGGTTAG GTATTAGGGA GGATAGGCTG
ATATTCAATA TAGAGGCCAA TTCCTTTCTT ACCCACCAGG TACGGAATAC TATCGGGACA
CTGGTGGAGT TAGGACGCGG GACTATGAGC ATGAGTGAGT TTGAGGCATT ATTTGAGGCT
AAAACCCCCG GACTGGCGGG GCCGGCAGCG CCGGCTTGTG GACTGAGCCT CGTTCGGGTA
AACTATAGAG AACCTTTTGG GAGTTAA
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| Protein sequence | MLLVIEYEGT RYSGFQVQDK GATIQGELET AIRKLTSEQT RVSGSGRTDA GVHAAYQVVS
YLSESSLGLD KIKGGLNFYL PPDIAVKEVH FVAESFDVRR RAISREYSYQ ILNSKTRSPL
ARLQAWQVPY KLDIKLMEQA FKMLEGEHDF IAFASSLGPE IKKTVRRVNW TRLGIREDRL
IFNIEANSFL THQVRNTIGT LVELGRGTMS MSEFEALFEA KTPGLAGPAA PACGLSLVRV
NYREPFGS
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