| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0492 |
|---|
| Symbol | rpmD |
|---|
| ID | 3230238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 453924 |
|---|
| End bp | 454106 |
|---|
| Gene Length | 183 bp |
|---|
| Protein Length | 60 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637120058 |
|---|
| Product | 50S ribosomal protein L30 |
|---|
| Protein accession | YP_181236 |
|---|
| Protein GI | 57234769 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.278097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAGA TTAAGATTAC CTGGGTAAAA AGTGCTATCG GTTATAAATT TGATCAGGCG
GCCACTATCA AGGCGCTTGG TTTTAAAAAA TTAAATCAGA GTGTTATACA GGATGATTCT
GCTGCTATAC GCGGCATGAT ACTCAAGGTA AGGCATCTTG TTGTTCTGGA AGAGGTGACC
TAA
|
|---|
| Protein sequence | MAKIKITWVK SAIGYKFDQA ATIKALGFKK LNQSVIQDDS AAIRGMILKV RHLVVLEEVT
|
|---|
| |