Gene DET0475 details

Gene Information

• Locus tag: DET0475
• Symbol: rplD
• ID: 3230154
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 446400
• End bp: 447032
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120041
• Product: 50S ribosomal protein L4
• Protein accession: YP_181219
• Protein GI: 57234685
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00700158
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAATTC CTGTTTATAA CGCATCCGGA GAAATCATTA AGAATATCAG CATCAGCGAA 
GACGTCTTTG GCGTGCCCTT CAATGAAGCT CTGGTTCATC AGGCTTTTGT AGCCCAGCAG 
GCGAATGCCC GCCAGGGTAC TCAGTCCACC AAGACCAGAG GTGAAGTACA GGGTTCAAGC 
CGCAAGATAT ATCGCCAGAA GGGTACCGGT AATGCCCGTA TGGGTACCAA CCGCTCACCC 
GTCAGGCGGC ATGGCGGCGT AGCCTTTGGC CCCCGCCCCA GGGACTTCAG CAAGGATTTG 
CCCAAGAAGA TGCGCCGTCA GGCCATCAGG TGCGTGCTGT CCTTCAAACT GGAAAGCGGC 
GAACTGAAGG TTGTTGATCA GCTTAGCTTT GATGAACCCA AGACCAGAGA TATGGCCAAG 
ATACTTGCGG CTCTTCAGGT AATGTCTCCC ACGCTTATAG CGGTAGATAA TCCTGATACC 
AATTTTATAA AGTCTGCCCG CAATATACCG GCAGTCAAAA CCACTCCGGC TAATCTTCTG 
AATATATCTG ATATGCTCAG GAACAAGCAG CTGGTTATGA CTGAAGAAGC GGTACGTCAG 
GTTGAAGAAC TCTGGGGTCA GCGCTCACGC TAA 

 

Protein sequence

MEIPVYNASG EIIKNISISE DVFGVPFNEA LVHQAFVAQQ ANARQGTQST KTRGEVQGSS 
RKIYRQKGTG NARMGTNRSP VRRHGGVAFG PRPRDFSKDL PKKMRRQAIR CVLSFKLESG 
ELKVVDQLSF DEPKTRDMAK ILAALQVMSP TLIAVDNPDT NFIKSARNIP AVKTTPANLL 
NISDMLRNKQ LVMTEEAVRQ VEELWGQRSR