Gene DET0461 details

Gene Information

• Locus tag: DET0461
• Symbol: tyrA
• ID: 3230182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 434281
• End bp: 435357
• Gene Length: 1077 bp
• Protein Length: 358 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637120027
• Product: chorismate mutase/prephenate dehydratase
• Protein accession: YP_181205
• Protein GI: 57234713
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0077] Prephenate dehydratase; [COG1605] Chorismate mutase
• TIGRFAM ID: [TIGR01808] monofunctional chorismate mutase, high GC gram positive type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.123975
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTTT CAGACCTGCG CAAACAGATA GATGAACTGG ATGCCGAGCT GGTCAAGCTG 
ATGGCAAAGA GGCTTGAGGT ATCCGACCAG ATAGGCAAAG TCAAAGAAGA AACTAACTCC 
CCTGTTCAGG ACCTCTCACG TGAATCAGAG GTTTTAAACA GGGTTCAGTC ACTGGCCCGG 
TCTCTGGGTC TTGACCCGCA GGATATTGAA TCCCTGTACC AGGAAATACT GTTTATATCC 
AAGAAACAGC AGCGGTTCAC CGTAGCCTTT CAGGGAGCGG CCGGTGCTTA CAGTGAGGAA 
ACTGCCCTGA AAATATTCGG CCCCAACACC CTCGCCCTGC CTTACGAACA GCTGGACGGG 
GCTTTTGAGG CAGTGGAAAA AGGAATGGCC CGCTTTGCGG TAGTGCCGGT GGAAAACTCA 
CTTGAGGGCT CTATTTCCCG CACCTATGAC CTGCTGTTTG ATTCTAACCT TATGGTTGCC 
GCCGAACATG AGCTAAGGGT TTCCCACTGT CTGATAGCCA ACCCCGAAAC CACTCTGGAA 
GGGGTAAAAA CCATTTATTC CCACCCCCAG GCACTGGGGC AATGCCAGTC ATTTTTAAAA 
CACCTGCGGG CAGAGCTGAT ACCGGCCTAC GATACCGCCG GCAGTGTCAA AATGATTAAA 
GAAAAACACC TTTTAGACGG GGCGGCCATC GCCTCTGAAA GAGCGGCCGT AATTTATAAT 
ATGAAAGTGC TGGAACGGGA AATAGAGGAT AATATAAACA ACTACACCCG TTTCTTCGTC 
CTTGCCAAGC AGGATTCCGC ACCCAGCGGC AATGATAAAA CTTCGGTGGT CTTCGCCGTC 
AAACATGAGG CCGGGGCGCT GTATGACTTC ATAAAGGAAC TGGCCTCCAG AAAAATAAAT 
ATGACCAAGC TGGAATCCCG TCCCACCCGC CTTAAACCCT GGGAGTACAA CTTTTACCTG 
GATATAGAAG GCCACCGCCA GGACGAAAAC ATTAAACAGG CGCTGGCAAA AGCCGAAGAC 
CATGTTATAT TTATGAAAGT GCTTGGGTCT TACCCCAAAA TGAAAAAACG AATATGA 

 

Protein sequence

MNLSDLRKQI DELDAELVKL MAKRLEVSDQ IGKVKEETNS PVQDLSRESE VLNRVQSLAR 
SLGLDPQDIE SLYQEILFIS KKQQRFTVAF QGAAGAYSEE TALKIFGPNT LALPYEQLDG 
AFEAVEKGMA RFAVVPVENS LEGSISRTYD LLFDSNLMVA AEHELRVSHC LIANPETTLE 
GVKTIYSHPQ ALGQCQSFLK HLRAELIPAY DTAGSVKMIK EKHLLDGAAI ASERAAVIYN 
MKVLEREIED NINNYTRFFV LAKQDSAPSG NDKTSVVFAV KHEAGALYDF IKELASRKIN 
MTKLESRPTR LKPWEYNFYL DIEGHRQDEN IKQALAKAED HVIFMKVLGS YPKMKKRI