Gene DET0441 details

Gene Information

• Locus tag: DET0441
• Symbol: uvrB
• ID: 3230218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 418392
• End bp: 420398
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120007
• Product: excinuclease ABC subunit B
• Protein accession: YP_181185
• Protein GI: 57234749
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGATT TCAAAATAGT CTCGGATTTT GCACTTACCG GTGACCAGCC CCAGGCGGTG 
GAAAAACTCT CTGAGGGGCT GGCACATGGC CTTACAGACC AGACCCTGCT GGGGGTTACC 
GGCTCCGGTA AAACATTTAC CATGGCAAAT GTAATTGCCA GAGTAAACCG CCCCACCCTG 
ATAATCAGCC ACAATAAAAC TCTGGCTGCC CAGCTTTACT CCGAAATGAA AGAATTCCTG 
CCCGAAAATT CGGTGGAATA CTTTGTAAGT TATTATGATT ATTACCAGCC TGAAGCTTAT 
GTCCCCCAAA AGGACATGTA TATTGAAAAA GACGCTGACA TAAACGAGGA AATTGATAAA 
CTCCGCCATG CGGCCACCCG CGCCCTGTTT GAACGGCGGG ATGTGGTTAT AGTAGCCTCG 
GTTTCCTGCA TTTACGGTTT GGGTGAACCC GAAGAATACC GCAGTTTTGT ACTCCCTTTG 
AAAAAGGGCC AGTCCCTGAG GCGTGACCTT ATACTGCGGC GGCTGGTGGA TATGCAGTAT 
GAGCGGAATG ACATAGATTT CTCCCGCGGC AAGTTCCGCC TGCGGGGAGA CACCCTTGAA 
ATCCAGCCTG CCTACGAAGA ACTGGCTCTC AGAGTGGAGT TTTTCGGTGA TGAGATAGAA 
CGGATAGTCA GCCTTGACCC GGTAAGCGGC GAACTGCTGG CTGACATAGA TGAGATAAAT 
ATCTACCCCG CCAAGCATTT TGTAACCTCA GCCGAAAAAA TGGCCGAAGC TATAAAGGGC 
ATTCAGGCCG AGCTTGAAGA CCGCCTGAAG GAACTGGAAG CCGAGGGCAA AATGCTGGAG 
GCCGCCCGCC TGAAGCAGCG CACCAATTAT GACCTTGAAA TGATGCAGCA GGCGGGGTAT 
TGCTCCGGGG TGGAAAACTA TTCCCGCCAC CTGGCAGGAC GGAAAGCAGG CAGCGCCCCC 
TGGACACTGC TGGATTACTT TCCGGAAGAT TTCCTGCTGA TAGTAGATGA ATCCCATATG 
AGCCTGCCCC AAATACGGGG TATGTATGCC GGAGATGCCG CCCGCAAGAA AACCCTGGTG 
GACTACGGCT TCCGCCTGCC CTCAGCCATG GATAACCGCC CCTTAAGCTT TGATGAATTT 
AAAGCCAGAG TCAAACAGGC TATTTACGTA TCAGCCACAC CCGGCCCATA TGAAAAAGAA 
CACTCCCAGC AGGTAGTTGA GCAACTGGTA CGCCCCACCG GGCTGCTTGA ACCGGTTATA 
ACCGTAAAAC CCACCGGCGG CCAGATAGAT GACCTGCTGG AAGAAGTAAA GAAACGGGTA 
GATAAAAAAG AACGGGTGCT TATCACTACC CTTACCAAAA AGATGTCTGA AAAACTGGCA 
GATTATCTGG TGGAAATGGG AATAAAAACC CATTATCTGC ATTCGGAAGT AGACACGCTG 
GAACGGGTGG AAATCCTGCG TGATTTGCGG CTGGGGGTTT ATGACGTTAT AGTAGGTATA 
AACCTGCTCC GCGAAGGGCT TGACCTGCCT GAAGTCAGCC TGGTGGCCAT ACTGGATGCC 
GACAAAGAGG GTTATCTGCG GAGCGAACAG GCCCTTATCC AAACTATGGG GCGGGCTGCC 
CGCCATGTGG ACGGGCAGGT TATCATGTAT GCAGATAAAA TCACCGGGTC TATGCAGCGG 
GCTATGGACG AAATCAGCCG CCGCCGCAAA ATACAGGAAG ACTATAACCG CCTGCACAAT 
ATTACCCCGC AGGGTATCCG CAAGGCTATC AAGGATATAA ATGAACGTAT CCGCTCAGTC 
ACCGCCGAAG TCAGCGGCCC TGAATTCAGG CCTGCCCCCA CTCTCAGGGA AGACATTGTC 
CGTTTGATAA AAGAACTGGA AAGCCAGATG AAAAAAGCGG CCAAAAATCT GGAATTTGAA 
CGGGCTGCCC TTATCCGTGA CCGGGTGGTA GAACTGCGGG CGGCACTTGA AACAGACCCC 
GTAAATAAAA ATGAAAGAAC CAAGTAA 

 

Protein sequence

MPDFKIVSDF ALTGDQPQAV EKLSEGLAHG LTDQTLLGVT GSGKTFTMAN VIARVNRPTL 
IISHNKTLAA QLYSEMKEFL PENSVEYFVS YYDYYQPEAY VPQKDMYIEK DADINEEIDK 
LRHAATRALF ERRDVVIVAS VSCIYGLGEP EEYRSFVLPL KKGQSLRRDL ILRRLVDMQY 
ERNDIDFSRG KFRLRGDTLE IQPAYEELAL RVEFFGDEIE RIVSLDPVSG ELLADIDEIN 
IYPAKHFVTS AEKMAEAIKG IQAELEDRLK ELEAEGKMLE AARLKQRTNY DLEMMQQAGY 
CSGVENYSRH LAGRKAGSAP WTLLDYFPED FLLIVDESHM SLPQIRGMYA GDAARKKTLV 
DYGFRLPSAM DNRPLSFDEF KARVKQAIYV SATPGPYEKE HSQQVVEQLV RPTGLLEPVI 
TVKPTGGQID DLLEEVKKRV DKKERVLITT LTKKMSEKLA DYLVEMGIKT HYLHSEVDTL 
ERVEILRDLR LGVYDVIVGI NLLREGLDLP EVSLVAILDA DKEGYLRSEQ ALIQTMGRAA 
RHVDGQVIMY ADKITGSMQR AMDEISRRRK IQEDYNRLHN ITPQGIRKAI KDINERIRSV 
TAEVSGPEFR PAPTLREDIV RLIKELESQM KKAAKNLEFE RAALIRDRVV ELRAALETDP 
VNKNERTK