Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0434 |
Symbol | secA |
ID | 3230233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 408241 |
End bp | 411099 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120000 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_181178 |
Protein GI | 57234764 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAT TTTTTTCCGG CTTCGGAGAC TCAAACGAAA AAGAGATCCG GGCACTTGAA CCGCTGGTAG ACAAAATAAA CCAGCTGGAA AGCTCTTTTT CCGCCCTCAG TGATGAAGCC CTGAAGGCCA AAACTGCCGA ATTTAAGGAA CGGCTGAAAG AAACTTTTGA AACTACCGCC TCCGCTATCC TGAAAGATAT CGCCGGTACT ACCGCCGAAC TTGAAGAAGC CCAGAAAACG GCTGACAACA GCAAACAAAG CCGCCTCAAG GCTAAGCTTG AGTCTTTAAA TAAAGACCTT TCCGTTAAAG AAAACGCCGC TCTTAACGCC ATTCTGCCCG AAGCCTTTGC CGCTGTCAGG GAAGCCTCCC GCCGGACTAT CGGCCTCAGG CACTATGACG TTCAGCTTAT CGGCGGTATG GTGCTTCACC ACGGCAAAAT AGCCGAGATG CGCACCGGTG AAGGTAAGAC CCTGGTAGCC ACTCTGCCCC TTTACCTTAA TTCCCTGCTG GGAAAGGGTG TCCATCTGGT AACAGTTAAT GATTATCTGG CCAGACGTGA CGCTTACTGG ATGGGGCCGG TCTACCATGC GCTGGGGGTC AGCGTTTCCA GTATTTACCC CATGCAGACA CCCACCGAAG AACTGCCTTC ACGGCTGTTT GACCCCACTT ATACCTCTGA AACACCTAAT GACCCCTGGA TGCATTTCCG CCCTATATCC CGGCAGGAAG CCTATAAAGC AGATATTACC TACGGCACTT CCACCGAATT CGGCTTTGAT TACCTGCGGG ATAATCTGCG GCCTGACCTT GCCCAGTGTG TCCAGCGGGA AATGAACTAT GCCATAGTAG ACGAAATTGA CAACCTGCTT ATAGATGAAG CCCGCACCCC TCTTATCATA TCCGCTCCGG ATACCGAGGC AGGTAAACTG TACGAGGTCT TTGCCCGGCT GGCTCCCCGT TTGGCGGCAG GGAAAGACTA CGAGATAAAC GAAAAAGACC GTAATGCCGA ACTGACCGAA GACGGCTGGG CAAATGTGGA AAAACTGCTT TCACGCGAAG GAGTTATGAA GGGCAGCAGC CTGTATGACC CCCAGAATGC CCCCCTTATC CGCCATCTGC GTAATGCCCT CTCCGCCAAG GAGTTTTATA AAAAAGACCA CCAGTATGTA GTCAAGGAAA ATGAAGTTAT CATAATTGAC GAATTCACCG GCCGCATGAT GCTGGGACGG CGTTATTCCG AGGGCTTGCA CCAGGCTATC GAAGCCAAAG AACACGTAAA AATCCAGCAG GAAAGCAAGA CCTATGCCAC CGTGACCATC CAGAATCTGT TCCGCATGTA CCGCAAACTC TGTGGCATGA CAGGTACGGC GGCCACCGAG GCAGAGGAAT TTTCCAAGAT TTATAAACTG GAAGTAGTTA TTATCCCTAC CAACAAACCT GCCATCCGCG AAGATTACGG TGACCAGATA TATAAAGACC AGTCCGCCAA GTTTAAGGCA GTGGTCAATG AAATAAACGA GATGCGGAAT CTGGGACGCC CGGTGCTGGT GGGTACAGTT TCCATTGAAA ACTCTGAAAT GCTCTCAAAC ATGCTTAAAC GGCAGGGTAT TGAGCACAAG GTACTTAATG CCAAACAGCA TGAAAAAGAG GCTCAGGTGG TAGCCGAAGC CGGCAAACCG GGGGCGGTAA CCGTAGCTAC CAACATGGCC GGACGCGGTG TGGACATACT GCTGGGCGGC AAAGAACCGC CTAAAGATGA TGACAAAGCC TATAGCCAGT GGCAGGTCCA CCACCAGCAG GTGCTGGAAG CCGGCGGCTT ACACGTAATA GGTACAGAAC GCCACGAATC CAGACGGATT GATAACCAGC TTCGGGGACG CTCAGGCCGC CAGGGAGACC CCGGTTCTTC CCGTTTCTAC GTAGCACTGG ATGATGATAT TATGCGCCGT TTCGGCAGTG AACGCATACA GGGCATTATG GAATGGGCCG GCATGGACGA AAACACCCCC ATAGAAAACG GGCTGGTCAG CCGTACTCTG GAAAACGCCC AGAAACGGGT GGAGGGTTAC CATTTTGATG TGCGCAAACA CCTGGTGGAA TATGATGACG TAGTTAACAA GCACCGCGAG GTTATCTATG CGGAACGCCG CAAGATACTC CTGGGGGCAG ACCTGAAATC AAACATACTG GATATGATTC GGGAAGAGAT AATGACCCAG ACTGCCGAAC ATACCCAGGG ATATGACTCT TCCGAATGGA ATCTGGAAGG GTTAGTCACC CATATAGGCG GCATTTTTGC CCTGCCCGCC GAAATAAATG CAGAGGCACT GGCAAAACTT TCCCAGGAGG AAATAACCGA ACTCCTTACC CGTACCGCCG AAGAGCTTTA CCAGAAGAAA GAAGCTGAAA TCGGGGCAGG CTCCATGAGG CTGCTTGAAC GGATTATTAT GCTCCACACC CTGGATTCCC TGTGGGTGGA ACACCTGACA ATCATGGAAA ACTTAAGACG GGAAATAGGA CTTCAGGCAT TTGCTCAGCG TGACCCGCTG ATAGCTTACA AAAACGAAGG CCACGTCCGT TTTCAGGAAT TGCTGGAAAC TATCAAACAT GATGTAGTGC ATAATATTTA CCGGGTGAAT ATCCAGATTC AGCACCAGAC TGAATCTGCC ACCGCCAAGG CTGCCTCCCG CCCGGTGCAG CAGCAAAAAC CCCTGCCAGC CGCACCCGCC GCCGCTATAC CCGGTGTCTC CGCCAAAGCC GCTACCCAAC CGGCCGCACC TGCTGCTAAA GAAGTAGGCC GGAATGACCC CTGTCCCTGC GGCAGCGGCA AAAAATACAA AAAATGCTGC GGCAAATAG
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Protein sequence | MFKFFSGFGD SNEKEIRALE PLVDKINQLE SSFSALSDEA LKAKTAEFKE RLKETFETTA SAILKDIAGT TAELEEAQKT ADNSKQSRLK AKLESLNKDL SVKENAALNA ILPEAFAAVR EASRRTIGLR HYDVQLIGGM VLHHGKIAEM RTGEGKTLVA TLPLYLNSLL GKGVHLVTVN DYLARRDAYW MGPVYHALGV SVSSIYPMQT PTEELPSRLF DPTYTSETPN DPWMHFRPIS RQEAYKADIT YGTSTEFGFD YLRDNLRPDL AQCVQREMNY AIVDEIDNLL IDEARTPLII SAPDTEAGKL YEVFARLAPR LAAGKDYEIN EKDRNAELTE DGWANVEKLL SREGVMKGSS LYDPQNAPLI RHLRNALSAK EFYKKDHQYV VKENEVIIID EFTGRMMLGR RYSEGLHQAI EAKEHVKIQQ ESKTYATVTI QNLFRMYRKL CGMTGTAATE AEEFSKIYKL EVVIIPTNKP AIREDYGDQI YKDQSAKFKA VVNEINEMRN LGRPVLVGTV SIENSEMLSN MLKRQGIEHK VLNAKQHEKE AQVVAEAGKP GAVTVATNMA GRGVDILLGG KEPPKDDDKA YSQWQVHHQQ VLEAGGLHVI GTERHESRRI DNQLRGRSGR QGDPGSSRFY VALDDDIMRR FGSERIQGIM EWAGMDENTP IENGLVSRTL ENAQKRVEGY HFDVRKHLVE YDDVVNKHRE VIYAERRKIL LGADLKSNIL DMIREEIMTQ TAEHTQGYDS SEWNLEGLVT HIGGIFALPA EINAEALAKL SQEEITELLT RTAEELYQKK EAEIGAGSMR LLERIIMLHT LDSLWVEHLT IMENLRREIG LQAFAQRDPL IAYKNEGHVR FQELLETIKH DVVHNIYRVN IQIQHQTESA TAKAASRPVQ QQKPLPAAPA AAIPGVSAKA ATQPAAPAAK EVGRNDPCPC GSGKKYKKCC GK
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