Gene DET0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0434 
SymbolsecA 
ID3230233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp408241 
End bp411099 
Gene Length2859 bp 
Protein Length952 aa 
Translation table11 
GC content52% 
IMG OID637120000 
Productpreprotein translocase subunit SecA 
Protein accessionYP_181178 
Protein GI57234764 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAT TTTTTTCCGG CTTCGGAGAC TCAAACGAAA AAGAGATCCG GGCACTTGAA 
CCGCTGGTAG ACAAAATAAA CCAGCTGGAA AGCTCTTTTT CCGCCCTCAG TGATGAAGCC
CTGAAGGCCA AAACTGCCGA ATTTAAGGAA CGGCTGAAAG AAACTTTTGA AACTACCGCC
TCCGCTATCC TGAAAGATAT CGCCGGTACT ACCGCCGAAC TTGAAGAAGC CCAGAAAACG
GCTGACAACA GCAAACAAAG CCGCCTCAAG GCTAAGCTTG AGTCTTTAAA TAAAGACCTT
TCCGTTAAAG AAAACGCCGC TCTTAACGCC ATTCTGCCCG AAGCCTTTGC CGCTGTCAGG
GAAGCCTCCC GCCGGACTAT CGGCCTCAGG CACTATGACG TTCAGCTTAT CGGCGGTATG
GTGCTTCACC ACGGCAAAAT AGCCGAGATG CGCACCGGTG AAGGTAAGAC CCTGGTAGCC
ACTCTGCCCC TTTACCTTAA TTCCCTGCTG GGAAAGGGTG TCCATCTGGT AACAGTTAAT
GATTATCTGG CCAGACGTGA CGCTTACTGG ATGGGGCCGG TCTACCATGC GCTGGGGGTC
AGCGTTTCCA GTATTTACCC CATGCAGACA CCCACCGAAG AACTGCCTTC ACGGCTGTTT
GACCCCACTT ATACCTCTGA AACACCTAAT GACCCCTGGA TGCATTTCCG CCCTATATCC
CGGCAGGAAG CCTATAAAGC AGATATTACC TACGGCACTT CCACCGAATT CGGCTTTGAT
TACCTGCGGG ATAATCTGCG GCCTGACCTT GCCCAGTGTG TCCAGCGGGA AATGAACTAT
GCCATAGTAG ACGAAATTGA CAACCTGCTT ATAGATGAAG CCCGCACCCC TCTTATCATA
TCCGCTCCGG ATACCGAGGC AGGTAAACTG TACGAGGTCT TTGCCCGGCT GGCTCCCCGT
TTGGCGGCAG GGAAAGACTA CGAGATAAAC GAAAAAGACC GTAATGCCGA ACTGACCGAA
GACGGCTGGG CAAATGTGGA AAAACTGCTT TCACGCGAAG GAGTTATGAA GGGCAGCAGC
CTGTATGACC CCCAGAATGC CCCCCTTATC CGCCATCTGC GTAATGCCCT CTCCGCCAAG
GAGTTTTATA AAAAAGACCA CCAGTATGTA GTCAAGGAAA ATGAAGTTAT CATAATTGAC
GAATTCACCG GCCGCATGAT GCTGGGACGG CGTTATTCCG AGGGCTTGCA CCAGGCTATC
GAAGCCAAAG AACACGTAAA AATCCAGCAG GAAAGCAAGA CCTATGCCAC CGTGACCATC
CAGAATCTGT TCCGCATGTA CCGCAAACTC TGTGGCATGA CAGGTACGGC GGCCACCGAG
GCAGAGGAAT TTTCCAAGAT TTATAAACTG GAAGTAGTTA TTATCCCTAC CAACAAACCT
GCCATCCGCG AAGATTACGG TGACCAGATA TATAAAGACC AGTCCGCCAA GTTTAAGGCA
GTGGTCAATG AAATAAACGA GATGCGGAAT CTGGGACGCC CGGTGCTGGT GGGTACAGTT
TCCATTGAAA ACTCTGAAAT GCTCTCAAAC ATGCTTAAAC GGCAGGGTAT TGAGCACAAG
GTACTTAATG CCAAACAGCA TGAAAAAGAG GCTCAGGTGG TAGCCGAAGC CGGCAAACCG
GGGGCGGTAA CCGTAGCTAC CAACATGGCC GGACGCGGTG TGGACATACT GCTGGGCGGC
AAAGAACCGC CTAAAGATGA TGACAAAGCC TATAGCCAGT GGCAGGTCCA CCACCAGCAG
GTGCTGGAAG CCGGCGGCTT ACACGTAATA GGTACAGAAC GCCACGAATC CAGACGGATT
GATAACCAGC TTCGGGGACG CTCAGGCCGC CAGGGAGACC CCGGTTCTTC CCGTTTCTAC
GTAGCACTGG ATGATGATAT TATGCGCCGT TTCGGCAGTG AACGCATACA GGGCATTATG
GAATGGGCCG GCATGGACGA AAACACCCCC ATAGAAAACG GGCTGGTCAG CCGTACTCTG
GAAAACGCCC AGAAACGGGT GGAGGGTTAC CATTTTGATG TGCGCAAACA CCTGGTGGAA
TATGATGACG TAGTTAACAA GCACCGCGAG GTTATCTATG CGGAACGCCG CAAGATACTC
CTGGGGGCAG ACCTGAAATC AAACATACTG GATATGATTC GGGAAGAGAT AATGACCCAG
ACTGCCGAAC ATACCCAGGG ATATGACTCT TCCGAATGGA ATCTGGAAGG GTTAGTCACC
CATATAGGCG GCATTTTTGC CCTGCCCGCC GAAATAAATG CAGAGGCACT GGCAAAACTT
TCCCAGGAGG AAATAACCGA ACTCCTTACC CGTACCGCCG AAGAGCTTTA CCAGAAGAAA
GAAGCTGAAA TCGGGGCAGG CTCCATGAGG CTGCTTGAAC GGATTATTAT GCTCCACACC
CTGGATTCCC TGTGGGTGGA ACACCTGACA ATCATGGAAA ACTTAAGACG GGAAATAGGA
CTTCAGGCAT TTGCTCAGCG TGACCCGCTG ATAGCTTACA AAAACGAAGG CCACGTCCGT
TTTCAGGAAT TGCTGGAAAC TATCAAACAT GATGTAGTGC ATAATATTTA CCGGGTGAAT
ATCCAGATTC AGCACCAGAC TGAATCTGCC ACCGCCAAGG CTGCCTCCCG CCCGGTGCAG
CAGCAAAAAC CCCTGCCAGC CGCACCCGCC GCCGCTATAC CCGGTGTCTC CGCCAAAGCC
GCTACCCAAC CGGCCGCACC TGCTGCTAAA GAAGTAGGCC GGAATGACCC CTGTCCCTGC
GGCAGCGGCA AAAAATACAA AAAATGCTGC GGCAAATAG
 
Protein sequence
MFKFFSGFGD SNEKEIRALE PLVDKINQLE SSFSALSDEA LKAKTAEFKE RLKETFETTA 
SAILKDIAGT TAELEEAQKT ADNSKQSRLK AKLESLNKDL SVKENAALNA ILPEAFAAVR
EASRRTIGLR HYDVQLIGGM VLHHGKIAEM RTGEGKTLVA TLPLYLNSLL GKGVHLVTVN
DYLARRDAYW MGPVYHALGV SVSSIYPMQT PTEELPSRLF DPTYTSETPN DPWMHFRPIS
RQEAYKADIT YGTSTEFGFD YLRDNLRPDL AQCVQREMNY AIVDEIDNLL IDEARTPLII
SAPDTEAGKL YEVFARLAPR LAAGKDYEIN EKDRNAELTE DGWANVEKLL SREGVMKGSS
LYDPQNAPLI RHLRNALSAK EFYKKDHQYV VKENEVIIID EFTGRMMLGR RYSEGLHQAI
EAKEHVKIQQ ESKTYATVTI QNLFRMYRKL CGMTGTAATE AEEFSKIYKL EVVIIPTNKP
AIREDYGDQI YKDQSAKFKA VVNEINEMRN LGRPVLVGTV SIENSEMLSN MLKRQGIEHK
VLNAKQHEKE AQVVAEAGKP GAVTVATNMA GRGVDILLGG KEPPKDDDKA YSQWQVHHQQ
VLEAGGLHVI GTERHESRRI DNQLRGRSGR QGDPGSSRFY VALDDDIMRR FGSERIQGIM
EWAGMDENTP IENGLVSRTL ENAQKRVEGY HFDVRKHLVE YDDVVNKHRE VIYAERRKIL
LGADLKSNIL DMIREEIMTQ TAEHTQGYDS SEWNLEGLVT HIGGIFALPA EINAEALAKL
SQEEITELLT RTAEELYQKK EAEIGAGSMR LLERIIMLHT LDSLWVEHLT IMENLRREIG
LQAFAQRDPL IAYKNEGHVR FQELLETIKH DVVHNIYRVN IQIQHQTESA TAKAASRPVQ
QQKPLPAAPA AAIPGVSAKA ATQPAAPAAK EVGRNDPCPC GSGKKYKKCC GK