Gene DET0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0425 
Symbol 
ID3230251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp397734 
End bp398393 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content49% 
IMG OID637119991 
Producthypothetical protein 
Protein accessionYP_181169 
Protein GI57234782 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.325475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT CCAGCCGTCT GCTTGTTGTC AGTGGTTTGT ATATTACCTG CCTTATCACC 
GCTAACCTTA TAGCGGTGAA AATTATTGCC CTGGGGGATA TATTTCTGCC GGCGGCGGTT 
ATAGTCTTTC CGTTCAGCTA TATCTTCGGG GATGTCCTGA CCGAGGTTTA CGGTTTCCAC 
TGGGCAAGGC GGATTATCTG GCTGGGCTTT ATCTGCAACC TTATTTTTGT GGTCTTTGTG 
GCTTTGGGTC AGGTACTGCC GGGTGCGCCC TTCTGGGAAG GGCAGGGGGC CTATGAGACC 
ATACTGGGTT ATACCCCGCG GATTTTGCTG GCATCTTTCC TGGGGTATCT GGTGGGTGAG 
TTTGTAAACT CATTTATAAT GGCCAAGCTG AAGCTGCGGA CACAAGGGCG TTACCTTTGG 
GTGCGTACTA TAGGCTCTAC TCTGGCCGGG CAGGGGCTGG ATACTTCCAT ATTTATTCTG 
GTGGCTTTTC TGGGTACGCC GGCATTTGTG CCGATGATGA TACTCTATCA CTGGGGTTCA 
AAGGTTATTA TTGAAGCAGC GGCTACACCT CTTACTTACA AGCTGGTGAA TTATCTGAAA 
AAAGCTGAAA AAAGTGACTA CTTTGATACA TCTACCAATT TCAGCCCTTT CCGGCTCTAG
 
Protein sequence
MNVSSRLLVV SGLYITCLIT ANLIAVKIIA LGDIFLPAAV IVFPFSYIFG DVLTEVYGFH 
WARRIIWLGF ICNLIFVVFV ALGQVLPGAP FWEGQGAYET ILGYTPRILL ASFLGYLVGE 
FVNSFIMAKL KLRTQGRYLW VRTIGSTLAG QGLDTSIFIL VAFLGTPAFV PMMILYHWGS 
KVIIEAAATP LTYKLVNYLK KAEKSDYFDT STNFSPFRL