Gene DET0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0392 
Symbol 
ID3230272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp372979 
End bp373809 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID637119958 
ProductAP endonuclease 
Protein accessionYP_181137 
Protein GI57234803 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000214103 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTT TACTTTTCGG CACCGCCGGC ATTCCCTATT CCACCCCCAA ACACACCACC 
CAGAACGGTA TCCACCGGGT GGCAGAGCTG GGGCTGGATG GCATGGAAAT AGAGTTTGTC
CGCGGGGTAT ATATGAAAGC CCCGGATACC AATCCGGTAC GCATACTTTC AGAGCTTCTC
CGCATAAAGC TGTCCGCCCA TGCCCCGTAC TACCTGAACT TTAATGCAGT GGAAGAAAAC
AAGGTTAAAA TGAGCCAGCA CCTGCTCTAC CAGTCCGCCA AAACGGCATC TCTGTGCGGG
GCGGGGTCAC TGGTATTTCA CCCAGGTTTT TACCTGACGG ATTCGCCTTC TGCCGCCTAC
GAAGCCATAC GGGATAATAT CCGCCCGGTG GCTGAACGTC TTCAGAAAGA GGGCTTTCCG
ATAAGCCTCC GCCCCGAAGT AAGCGGCAAA GTCACCCAGT TCGGAGACCT TAAGGAGACT
ATGGCACTTT GCAGCGAGAT ACCCGGCCTG CTGCCGACTA TAGATTTTTC CCATTACCAT
GCCCGCACCG GCAAATTCAA CTCTTATTCC GAGTTTAGTT TTATGTTAAC CACTATGGCT
GATTACCTGG GTGAAAGCGC CCTTAAAAAT ATGCATATAC ACATTTCCGG TATAGATTAC
TCACCCCGCG GCGAAAGACA GCACCTGAAC CTGGCTGAGT CAGATTTCAA TTATAAAGAA
CTGCTGCTTT GCCTTCGTGA CAAAGGCTGT GCCGGGCTGG TAATCTGCGA AAGCCCTAAT
CTGGAGGAAG ATGCCCTGCT TCTTAAAGAG ACCTACTTCT CTCTGGCCTG A
 
Protein sequence
MAGLLFGTAG IPYSTPKHTT QNGIHRVAEL GLDGMEIEFV RGVYMKAPDT NPVRILSELL 
RIKLSAHAPY YLNFNAVEEN KVKMSQHLLY QSAKTASLCG AGSLVFHPGF YLTDSPSAAY
EAIRDNIRPV AERLQKEGFP ISLRPEVSGK VTQFGDLKET MALCSEIPGL LPTIDFSHYH
ARTGKFNSYS EFSFMLTTMA DYLGESALKN MHIHISGIDY SPRGERQHLN LAESDFNYKE
LLLCLRDKGC AGLVICESPN LEEDALLLKE TYFSLA