| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0380 |
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| Symbol | |
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| ID | 3230298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 363149 |
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| End bp | 364030 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637119946 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_181126 |
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| Protein GI | 57234829 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.020658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCG GTACTTTCAA AGTAAAATCT GGCCTGGCTC AAATGCTCAA AGGCGGGGTG
ATTATGGATG TGACCACCCC CGAACAGGCT AAAATAGCGG AGGAAGCAGG CGCCTGTGCC
GTTATGGCGC TGGAGCGCGT ACCTTCGGAT ATAAGGGCGG CCGGCGGCGT TGCCCGCATG
GCAGACCCCA CTATTATTGA AAAGATTATG AAAGTAGTCA GCATACCCGT TATGGCCAAG
TGCCGCATAG GTCACTTTGT AGAAGCCCAG ATACTGGAAT CCATGGGGGT TGATTACATT
GATGAGTCCG AGGTGCTTAC CCCGGCGGAC GAAAGTTTTC ACGTCTGGAA ACATGATTTT
AAAGTCCCCT TCGTTTGCGG CTGCCGTGAT TTGGGTGAAG CCTTAAGGCG GATTGGCGAA
GGTGCAGCTA TGATACGCAC CAAGGGTGAG GCCGGTACCG GCAACATTGT GGAAGCGGTA
CGCCATATGC GTTCCGTTAT GGGCTCTGTC AGACGGGTAC AGTCTATGTC CGCTGACGAA
CTTTCCGCTT ATGCCAAAGA GATAAATGCA CCTTTGGAAC TGGTGCTTGA ACTTCACAAG
ACCGGTAAAC TGCCGGTAGT AAACTTTGCC GCCGGCGGGG TGGCTACCCC GGCTGATGCA
GCCCTGATGA TGCAGCTTGG GGCGGACGGG GTATTTGTAG GTTCAGGTAT ATTTAAATCA
TCTGACCCCG CCGCCATGGC CAAAGCCGTA GTCAAAGCGG TAACCCACTA TAAAGATGCC
AAAGTACTGG CCGAAATATC CAAGGGTCTG GGTGATGCCA TGCCCGGTCT GGATATAAAA
CAAATAGAAC CCGATAAACT GATTTCCCGC AGGGGCTGGT AA
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| Protein sequence | METGTFKVKS GLAQMLKGGV IMDVTTPEQA KIAEEAGACA VMALERVPSD IRAAGGVARM
ADPTIIEKIM KVVSIPVMAK CRIGHFVEAQ ILESMGVDYI DESEVLTPAD ESFHVWKHDF
KVPFVCGCRD LGEALRRIGE GAAMIRTKGE AGTGNIVEAV RHMRSVMGSV RRVQSMSADE
LSAYAKEINA PLELVLELHK TGKLPVVNFA AGGVATPADA ALMMQLGADG VFVGSGIFKS
SDPAAMAKAV VKAVTHYKDA KVLAEISKGL GDAMPGLDIK QIEPDKLISR RGW
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