Gene DET0371 details

Gene Information

• Locus tag: DET0371
• Symbol: dxr
• ID: 3230315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 354059
• End bp: 355192
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637119937
• Product: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• Protein accession: YP_181117
• Protein GI: 57234846
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase
• TIGRFAM ID: [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCATT CAATAAAAAA CATTGTCATA CTGGGGTCTA CCGGTTCTAT TGGCCGCCAG 
ACTCTGGAGG TTATCCATTC ACTGCCGGAC CGGTTCAAGG TACTGGGACT GGCTGGCGGA 
ACGAATGCAA ATCTGCTTAA AGAACAAACC GAGCAGTTCC GCCCCAAATA CATCTACTGC 
CAAAACTGCC ATGATACTAA CGCCTGTACC GCCCGTTTTA TCCCCATGGA GGAAATGGCC 
GCCCTGCCCG AAGCCGACAT AGTGGTAGTG GCCACCCCCG GCAGTGCCGG TTTGCAGCCG 
GTGCTTGCCG CTGCCAGAGC CGGCAAGGTA ATAGCTTTGG CCAACAAGGA ATCCCTGGTT 
TCAGCCGGGG AGATAGTAAC CGCCACCGCA CAGGAAAACA GAGCTAAAAT ACTGCCGGTG 
GACAGTGAAC ACAGTGCCAT CTGGCAGTGT TTGTCAGGTG AGGTCACACC CCCCGCCCGG 
ATTATCCTGA CCGCCTCAGG CGGACCTTTC CGTTCCTTAA CTAAAGACGA AATAGCCAAA 
GTCACCCCTG AACAGGCACT TAAGCACCCC TCCTGGAAAA TGGGAACCAA GGTTACCATA 
GACTCAGCCA GTCTCATGAA TAAAGGGCTG GAGATAATAG AAGCCCGCTG GCTGTTTGAT 
ATGCCGGTAC GGAATATTCA AGTGGTTATC CATCCCCAGA GCATTATTCA CTCCATGGTG 
GAGTTTGCAG ACGGCAGCCT TAAAGCCCAG CTGTCACGGC CGGATATGCG TTTCCCCATT 
CAGTGTGCTC TCACCTACCC CGAAAGGCTG ACCAACCTCA CCCTACCCCG CCTAAACTGG 
GCGGAAATAG GCAAGCTGGA CTTTGAAATG CCGGACATGG ACAGATTTCC CTGCCTGAAG 
TTAGCCATAT CCGCCGGAGA AGAAGGCAAA ACCTTTCCGG CAGCACTGTG CGCCGCAGAC 
GAATTGGCTG TTGAGATGTT CCTGAAGGGT GAGATAGGAT TCGGGCAGAT ACCCCAACTG 
ATAGCCAAAG TACTGGATGC CCATCAGGCT GTTGCCAGCC CATCTCTGGA TGATATTCTG 
GCCGCAGATG CCTGGGCACG CCGCAAAGTA ACCGAACTGG CAGGTAAACT ATAA 

 

Protein sequence

MVHSIKNIVI LGSTGSIGRQ TLEVIHSLPD RFKVLGLAGG TNANLLKEQT EQFRPKYIYC 
QNCHDTNACT ARFIPMEEMA ALPEADIVVV ATPGSAGLQP VLAAARAGKV IALANKESLV 
SAGEIVTATA QENRAKILPV DSEHSAIWQC LSGEVTPPAR IILTASGGPF RSLTKDEIAK 
VTPEQALKHP SWKMGTKVTI DSASLMNKGL EIIEARWLFD MPVRNIQVVI HPQSIIHSMV 
EFADGSLKAQ LSRPDMRFPI QCALTYPERL TNLTLPRLNW AEIGKLDFEM PDMDRFPCLK 
LAISAGEEGK TFPAALCAAD ELAVEMFLKG EIGFGQIPQL IAKVLDAHQA VASPSLDDIL 
AADAWARRKV TELAGKL