Gene DET0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0369 
SymbolispG 
ID3230317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp351938 
End bp352903 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID637119935 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_181115 
Protein GI57234848 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.392974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA CAGATACCCG CAATATCCCG GCTACAATTT CCCAAATAAA AGAGCTGGAA 
GAATGCGGCT GTGAAATAAT CCGGCTGGCT ATACCGGATA TGGAAGCCGC CACTGCCCTG 
AAATCTATCC GCAAAGAAGT CAGGATACCT ATTGTGGCGG ATATTCATTT TGATTACCGC 
CTGGCACTAG CAGCACTCTT AGCCGGGGCA GACGGCCTCA GGCTCAATCC CGGCAATATC 
GGTGACCCGG AACGGGTTAA AGCGGTGGTC AGGGCGGCAA AAGAACGGGA AATCCCAATC 
CGTATCGGGG TAAATGCCGG CAGCCTGCCC AAAGACCTGC CCCCAGAGCT CACCACTGCC 
CAAAAGATGG TCAAAGCCGC CATGGGGCAT ATAAAGATAC TGGAAGCCCT GGATTTCAGC 
CTGATTAAGG TTTCACTGAA GGCTTTTGAC GTGCCTACCA CCGTTGAAGC CTACCGCCAG 
ATAGCTTCCC TTATACCCTA CCCGCTTCAT GTGGGCATTA CCGAAACAGG CACCCCCAAA 
ACCGGTCTGG TGCGAAGTGC GGTGGGCATA GGCAACCTGC TGTATATGGG TATCGGGGAT 
ACTATCCGGG TTTCCCTGAC TTCCCCGCCC CAGGAAGAAG TATTTGCCGC TTATGAAATA 
CTGAAAAGCC TGAACTTAAG GCAGCGCGGC CCGGTGCTGG TCAGCTGCCC TACCTGCTCC 
CGGACCGAAG TGGATATTGT GGGTATTGCC GCCAGGGTGC AGGAAGCCCT GAACAAAATA 
GATAAACCGA TCAGGGTGGC CGTAATGGGC TGTGCCGTAA ACGGCCCCGG CGAAGCCAAA 
GAGGCTGATT TGGGCATAGC CTGCGGCAAG GGACAGGGGC TGCTATTCCG CAAGGGTGAA 
AAGATAGCCT CCTTTCCCGA AGATGAGCTG GTAAATGCCC TGCTGCGGGA AATAGCTTCC 
CTGTAG
 
Protein sequence
MTKTDTRNIP ATISQIKELE ECGCEIIRLA IPDMEAATAL KSIRKEVRIP IVADIHFDYR 
LALAALLAGA DGLRLNPGNI GDPERVKAVV RAAKEREIPI RIGVNAGSLP KDLPPELTTA 
QKMVKAAMGH IKILEALDFS LIKVSLKAFD VPTTVEAYRQ IASLIPYPLH VGITETGTPK 
TGLVRSAVGI GNLLYMGIGD TIRVSLTSPP QEEVFAAYEI LKSLNLRQRG PVLVSCPTCS 
RTEVDIVGIA ARVQEALNKI DKPIRVAVMG CAVNGPGEAK EADLGIACGK GQGLLFRKGE 
KIASFPEDEL VNALLREIAS L