Gene DET0344 details

Gene Information

• Locus tag: DET0344
• Symbol: nrdR
• ID: 3230365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 328749
• End bp: 329276
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637119911
• Product: transcriptional regulator NrdR
• Protein accession: YP_181091
• Protein GI: 57234896
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0225239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATTGTC CTTATTGCAG CCATCCTGAT ACCAAGGTTA TAGACTCAAG AGATGTTGAT 
GACGGGGTAC GACGAAGACG CGAATGTGTA GTTTGCGGGC AGCGCTTTAC CACCTATGAG 
CGGTTTCAGC CGGCCGGTCT CTTTGTAGTG AAAAAAGACC AGCGGCGTGA GGAGTTTAAT 
AAAGAAAAAT TGCTGAGCGG TCTCAGGCGT GCCTGTGAAA AACGCCCTTT GCCGGCCGGA 
GCGGTGGATA AGATAGCCGG AGATATAGAG GCCGAACTTT ACAATATGGG TAAGGCTGAA 
ATACCCAGTA CCCTTTTGGG GGATATGGTT ATGGAAAAGC TTAAGGCACT GGATAATATT 
GCCTATGTGC GCTTTGCCAG TGTCTACCGC GAGTTTACCG ATATTACCCA GCTTAAAAAA 
GTGGTGGACA ATCTGGTAAG CGGGCAGGAT GAGGGCATAC ATAAAGGGCA GCTGAGCCTG 
CTGCCTGAAG ACAGGGTCTC CCCCAAGACC AGATATCAGA GGAGATGA 

 

Protein sequence

MNCPYCSHPD TKVIDSRDVD DGVRRRRECV VCGQRFTTYE RFQPAGLFVV KKDQRREEFN 
KEKLLSGLRR ACEKRPLPAG AVDKIAGDIE AELYNMGKAE IPSTLLGDMV MEKLKALDNI 
AYVRFASVYR EFTDITQLKK VVDNLVSGQD EGIHKGQLSL LPEDRVSPKT RYQRR