| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0337 |
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| Symbol | priA |
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| ID | 3230382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 320720 |
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| End bp | 323167 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637119904 |
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| Product | primosomal protein N' |
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| Protein accession | YP_181084 |
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| Protein GI | 57234913 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.566686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTTTTG CCGAACTGGC CGTACACACT CCGGTACTTA GACCGGGCAG TTTTTCCTAC
TCTATACCAG CGGGGTTAGA AATAAAACCC GGTCAGGCAG TCTGGGCTCC TTTCGGGCCT
AAAATAGTTC AGGGCATAGT CCTTGAAGTA ACTGAAGAGC CGGCATTCGG GCAAACACGT
GAAATCTGCG GCGTTATCTC TGATACGCCG CTTCTTTCTT TTCACCAGCT GAACCTGGCC
AAGTGGATAA GCCAAACCTA TTTATCCAGT ATTTACGAAG CAGTAGCCCT CATGCTGCCG
CCGTCTTTTG AACGCCAAAG CCTGGCCTAT ATCAGCCTGG AGTCCAGCCC GCCGGCTGCA
GCAAAAAACC CGTCTGAAAC CCTAAGCCCA AACATGCAAA AAATATTTGA CCGGCTAAAG
GCCAAAGACA TCACCCCCCA AAACGAACTG GAAAAAATAT TCGGCAAGAA AACCGCTCAA
AGTGCCATAC TTAAACTTAT AAACCAGGGG CTAGTCAAAC GCACCTACCG GATAAGCCCG
GTCAGGGCAA AGACCAAATT TGAAAAACAT TTCCGCCTTA GCGTGCAGGC ACTGGCATTT
ATTAAAAACC AGACCCTGCC AAAATTACCC CCCCGCCAGA CTCAGGTTTT TAATCATATT
AAAGAAAACC CCGGGGGCAT TTCCAAAAGC GGGTTAAATC TGCTGGTGAA AAATAATTCG
GCCGTCTTAA AGACTCTTGA GCAAAAGGGT CTGGTAAGTA CCGAGGAACG CCAGATATTC
CGCCATCCTG TAGATTACAG CCGGATACCT CCTCTGCCGC ACCTTGAGCT AAGCCCACCC
CAGAAAAAGT GCCTTGAGTT CATCACCCGT TCACTGAATA CCCCGCCCGA AGATGACCAA
AATCCCCGTA CCTTTTTACT GCATGGCATA ACCGGCAGCG GTAAAACCGA AATATACCTG
CAGGCACTAG CTGAAAGCCT GCGTCTGGGC AAAAAGGCTA TAGTACTGGT ACCTGAAATC
TCCCTTACCC CCCAGACTAT CGCCCGTTTT GCGGGGCGTT TCCCCGGCCA AATAGCCGTT
CTTCACAGCC GCCTCAGTCC CGGTGAACAG TTTGACGAAT GGCAAAGGAT AAAAAACGGT
CAGGCTGACA TTGTAATCGG ACCCAGAAGC GCCCTGTTTG CCCCGCTGGA CAAACCGGGC
ATTATTATCA TAGACGAAGA GCACGAATGG ACCTATAAAC AGCAGGACCC CCAACCCCGT
TATCATACCC GTACGGTGGC TAATAAAATG GCTGAAGAGT ACGGTGCAGT GCTGGTACTG
GGGAGTGCCA CCCCGGATGT TGACAGCTAT TTCAAAGCCC AAAAAGGAAT CTATCAGTTA
CTGGAACTGC CCGAACGCCT GACCCCCTAC CGGGGTGCTT CCCTGCCTAA AACAGAGCTG
GTAGATATGC GTACCGAACT CTCCGAAGGC AACCGCAGCA TCTTCTCCCG TAACCTGCAG
ACCTCTATTG AAAAAGTACT GGCAAACCAT GAGCAGGCCA TTTTATTCAT AAACCGCCGG
GGCGGTGCCA GTTTTATCCA GTGCCGTGAC TGCGGCTATG TAGCTATGTG CAAAAGCTGT
GATGCCCCGC TTACATACCA CCCCGACCAG GAAAATCTGG TCTGCCACCA GTGCGGCAGG
CACTACCCAA ACCCCCTCAC CTGCCCGGTC TGCGGCAGCC GCCGGATTAA ATACCTGGGA
ATGGGTACCC AGAAACTGGA GGAAGAAACA AGACTGGCTT TCCCCCAGGC AAGGCTGCTT
CGCTGGGATA GTGATGTCAT AAAAGGCAAA AACACCCACC AGCAAATAAT GGATAGATTC
AGCTGCCACC AGGCAGATAT ACTTATCGGC ACACAGATGG TAGCCAAAGG GCTGGACCTG
CCGGATGTTA CTTTAGTAGG GGTAATAAAT GCGGATATCA GCCTGAACCT GCCTGATTTC
AGGGCAGGCG AACGCACTTT TCAGCTGCTG GCCCAGGTAG CCGGGCGGGC AGGCCGGGGT
ATATCAGGAG GGAAAGTAGT CATCCAGACC TACAGCCCTG AAAACTATGC CATCCGGTCA
GCTGTCTGCC ATGACTATCC GGGTTTTTAT GCCAAAGAAA TAGTCTACCG CCAGGCACTG
AATAACCCTC CCTTCCGGAA ACTGGCCTGT CTGGTATTCA GCCATTTGAA CCATGACTTT
TGTCAGCAGC AGGCCAAACT TATGGCTAAA ACCCTTCGGG AAAAAGCGGA GGCCGTTGGG
CTAGGCAATC TGGAAATTTT AGGACCGGCA CCTGCCTTTA TCCAGCGTCT GCGGGGACGT
TATAGATACC AGCTAATCCT GCGTTCGCCC AACCCGTCAG AGTTCCTCAG AGAGATAAAT
CCGGGACAGG GCTGGAGTAT TGATATTGAC CCTTATGGTT TATGTTAA
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| Protein sequence | MAFAELAVHT PVLRPGSFSY SIPAGLEIKP GQAVWAPFGP KIVQGIVLEV TEEPAFGQTR
EICGVISDTP LLSFHQLNLA KWISQTYLSS IYEAVALMLP PSFERQSLAY ISLESSPPAA
AKNPSETLSP NMQKIFDRLK AKDITPQNEL EKIFGKKTAQ SAILKLINQG LVKRTYRISP
VRAKTKFEKH FRLSVQALAF IKNQTLPKLP PRQTQVFNHI KENPGGISKS GLNLLVKNNS
AVLKTLEQKG LVSTEERQIF RHPVDYSRIP PLPHLELSPP QKKCLEFITR SLNTPPEDDQ
NPRTFLLHGI TGSGKTEIYL QALAESLRLG KKAIVLVPEI SLTPQTIARF AGRFPGQIAV
LHSRLSPGEQ FDEWQRIKNG QADIVIGPRS ALFAPLDKPG IIIIDEEHEW TYKQQDPQPR
YHTRTVANKM AEEYGAVLVL GSATPDVDSY FKAQKGIYQL LELPERLTPY RGASLPKTEL
VDMRTELSEG NRSIFSRNLQ TSIEKVLANH EQAILFINRR GGASFIQCRD CGYVAMCKSC
DAPLTYHPDQ ENLVCHQCGR HYPNPLTCPV CGSRRIKYLG MGTQKLEEET RLAFPQARLL
RWDSDVIKGK NTHQQIMDRF SCHQADILIG TQMVAKGLDL PDVTLVGVIN ADISLNLPDF
RAGERTFQLL AQVAGRAGRG ISGGKVVIQT YSPENYAIRS AVCHDYPGFY AKEIVYRQAL
NNPPFRKLAC LVFSHLNHDF CQQQAKLMAK TLREKAEAVG LGNLEILGPA PAFIQRLRGR
YRYQLILRSP NPSEFLREIN PGQGWSIDID PYGLC
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