Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0336 |
Symbol | |
ID | 3230383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 320063 |
End bp | 320464 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637119903 |
Product | DNA-binding protein, putative |
Protein accession | YP_181083 |
Protein GI | 57234914 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00628261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAAG CCACATCACC AAATGGCTGG GCAGACCTTG GAGAGATAAT CCGCCAGCAA AGGGTAAAAA TACCGCTTAC CCTGCAAGAA CTGGCTTCTA AAACCAGCGT CTCCCCCTCG CATCTGGGGC GCATTGAGCG CGGCGAGCGT TTTCCGTCTG CCAGAATACT CAAACGAATT GCCCGTCCGT TGGGTTTTGA AGAGGACGAG TTATTCACTC TGGCCGGATA TCTTACCCCC CAGAAGGACA GCATCTCGGA AATGGAAGCG GAATATATCT CTACCCCCAG ACAGCTTGAC CCTTACGTAG CCAAAGTACT GGCCCAGGAG CCTATTGAAC TGCAAAGGGC GGTTATTGCC ATTCTGGCCA TGCTGAAAAG TATCTCCAAA TCCATGACCT AG
|
Protein sequence | MSKATSPNGW ADLGEIIRQQ RVKIPLTLQE LASKTSVSPS HLGRIERGER FPSARILKRI ARPLGFEEDE LFTLAGYLTP QKDSISEMEA EYISTPRQLD PYVAKVLAQE PIELQRAVIA ILAMLKSISK SMT
|
| |