Gene DET0316 details

Gene Information

• Locus tag: DET0316
• ID: 3230308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 303681
• End bp: 304358
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637119883
• Product: DNA-binding response regulator
• Protein accession: YP_181064
• Protein GI: 57234839
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACCC TGATAATAGA GGATGATTTA TCCATAATTG ATCTGGTAGT GCTTACCCTT 
TCGGTAGCCT GGCCAGATAT CCAGATAGTT AGAACCCAGC TTGGCAAAGA GGGCATAGAG 
CTAGCTGAAA CCGAAGCGCC AGATTTTATT ATACTTGACC TTGGTCTGCC GGATATGAGC 
GGTATAGAAG TACTTCAGGA AATACGCAGT TTTTCCAAGG TGCCCGTTTT AGTGCTGACT 
GTAAAAAAAG ATGAGATGGA TGTGGTAGTG GCACTCAGCA AGGGAGCTGA CGAGTTTATC 
AGCAAACCTT TCCGCCAAAT GGAACTAATC TCCAGGGTAA AAAATGTCTT AAAGCGGTCA 
CATCCTTCGG AGGGTGAAGT ATACGCTATA GGTAACCTGA CCTACTATCC CGCCCTGAAC 
AAAATAGATT CTAAAGGTCT TGAACTTAAG CTTTCACCTA CTGAAAATAT CATCTTCCTT 
TATCTGGCTA ATCAGCGGCC GAATTATGTT ACCTACCGAA GCCTTGCCTT GGCCATCTGG 
GGTGATGAAT ATCCGGGTTG CCATAAAGCA ATACGGGTGA TGGTTAATCA GTTGAGAGAG 
AAGCTTGATT CATCATTGAA CCAGCCTGAT TTGATACTGA CTAAGTATGG TTTGGGTTAT 
TATCTTGGCA ACTGGTAA 

 

Protein sequence

MKTLIIEDDL SIIDLVVLTL SVAWPDIQIV RTQLGKEGIE LAETEAPDFI ILDLGLPDMS 
GIEVLQEIRS FSKVPVLVLT VKKDEMDVVV ALSKGADEFI SKPFRQMELI SRVKNVLKRS 
HPSEGEVYAI GNLTYYPALN KIDSKGLELK LSPTENIIFL YLANQRPNYV TYRSLALAIW 
GDEYPGCHKA IRVMVNQLRE KLDSSLNQPD LILTKYGLGY YLGNW