Gene DET0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0305 
Symbol 
ID3230334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp292640 
End bp293917 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content39% 
IMG OID637119872 
Productsensory box sensor histidine kinase 
Protein accessionYP_181053 
Protein GI57234865 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT CAAAACTCAA TACGAGCCCT GGATCAACAG CTGAGAGGCA TCAAACTCGA 
CCTGTTTCCA GATTGAATTC TTTAGCAACT AAATACAAAA TGACTCGCCG GATGATAAAT
CTAAATCTTT ACCGCCAGAA TAAAGAGCAA AAATCACAAA AACTTAACTG TCAGAAACTT
TATCGTAAGT ACAAGACCAT TTTTGATTTA AGCAGCGACC CAATTGTTAT CGCTGAAGTT
AAAGGCACCG GGCCACATGA CAGAATGATA GTGGAAATAA ATGAAGCCGC TATTAAACAT
TTTGGATATT CTAGAAGCGA ATTGCTAATG CATGATACTT CATTCCTGCA CCCCCCGGAG
GAAGTAGATG CGCTTTTATC CTGGGTTGGC ACAGAAATGA ATAAGAACCA CCACGTTTTT
TTTGAGGCTA AGCATCTTAG AAAAGACGGC AATGTATTGG ATGTGGAAAT TCACGCTACC
CAGATAGCCA TAGACAATTC GCCTATTTCG ATTGCTGTAA TACGTGACAT ATCCGAACGG
AAAAGCCTCG AAAAGCGAGC TATAAAGTTA CACCAAGCGG AACAAAAATT CCGTATAGAA
CTTGAAAGTC AAATATACCA AAGAACCGAA TTTTATAAAG CCTTAGTACA TGAACTAAAA
ACCCCGCTTA CACCCATAGT ACTAAATAGC GAAATGCTGG AAGACAACTT GGAGGGTAAG
CACAAGAAAT TAGCCGATAA CATTAAACTA TCCAGCTTAG AACTCTTAGC CCGTATAAAT
GAACTTTACG ATATGGCTAA AGGGGAAGTG GGTACTTTAC AAATAAACCG CACATGGATT
TCATTATTTG ACTTGATAAA TGAGATAGCT TCTGTGCTTA GCCCCAGCCT TAACTCTAAA
CAGTTAAGGC TTCATCTTTT CTTCAGGCCT CACTTACCCC CAGTATACGC AGATCAAAAC
CGGCTTAAAC AGGTCCTTGT AAATTTGCTG AATAACGCAA TAACATTCAG TCTGCCCAAG
AATAAAATCA CAATGATATG CGGTTTCAAT CAAAAATACG TAACCATTGA GATAATGGAC
GAAGGCACAG GTATTTCAGA AGATGACCTG CATAAACTAT TTAAACCGTA TGTACTTACC
AAATCAGATG GACTGGGCTT AGGTTTGGCC TTATCCAAGA AGATTATTGA ACTCCATAGC
GGTAAAATAC GGGTTAAAAG CATCAAAGAT ACAGGCAGCA AATTTTCAAT CATACTGCCT
GCCAATAATA CGGACTGA
 
Protein sequence
MRISKLNTSP GSTAERHQTR PVSRLNSLAT KYKMTRRMIN LNLYRQNKEQ KSQKLNCQKL 
YRKYKTIFDL SSDPIVIAEV KGTGPHDRMI VEINEAAIKH FGYSRSELLM HDTSFLHPPE
EVDALLSWVG TEMNKNHHVF FEAKHLRKDG NVLDVEIHAT QIAIDNSPIS IAVIRDISER
KSLEKRAIKL HQAEQKFRIE LESQIYQRTE FYKALVHELK TPLTPIVLNS EMLEDNLEGK
HKKLADNIKL SSLELLARIN ELYDMAKGEV GTLQINRTWI SLFDLINEIA SVLSPSLNSK
QLRLHLFFRP HLPPVYADQN RLKQVLVNLL NNAITFSLPK NKITMICGFN QKYVTIEIMD
EGTGISEDDL HKLFKPYVLT KSDGLGLGLA LSKKIIELHS GKIRVKSIKD TGSKFSIILP
ANNTD