Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0305 |
Symbol | |
ID | 3230334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 292640 |
End bp | 293917 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637119872 |
Product | sensory box sensor histidine kinase |
Protein accession | YP_181053 |
Protein GI | 57234865 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATAT CAAAACTCAA TACGAGCCCT GGATCAACAG CTGAGAGGCA TCAAACTCGA CCTGTTTCCA GATTGAATTC TTTAGCAACT AAATACAAAA TGACTCGCCG GATGATAAAT CTAAATCTTT ACCGCCAGAA TAAAGAGCAA AAATCACAAA AACTTAACTG TCAGAAACTT TATCGTAAGT ACAAGACCAT TTTTGATTTA AGCAGCGACC CAATTGTTAT CGCTGAAGTT AAAGGCACCG GGCCACATGA CAGAATGATA GTGGAAATAA ATGAAGCCGC TATTAAACAT TTTGGATATT CTAGAAGCGA ATTGCTAATG CATGATACTT CATTCCTGCA CCCCCCGGAG GAAGTAGATG CGCTTTTATC CTGGGTTGGC ACAGAAATGA ATAAGAACCA CCACGTTTTT TTTGAGGCTA AGCATCTTAG AAAAGACGGC AATGTATTGG ATGTGGAAAT TCACGCTACC CAGATAGCCA TAGACAATTC GCCTATTTCG ATTGCTGTAA TACGTGACAT ATCCGAACGG AAAAGCCTCG AAAAGCGAGC TATAAAGTTA CACCAAGCGG AACAAAAATT CCGTATAGAA CTTGAAAGTC AAATATACCA AAGAACCGAA TTTTATAAAG CCTTAGTACA TGAACTAAAA ACCCCGCTTA CACCCATAGT ACTAAATAGC GAAATGCTGG AAGACAACTT GGAGGGTAAG CACAAGAAAT TAGCCGATAA CATTAAACTA TCCAGCTTAG AACTCTTAGC CCGTATAAAT GAACTTTACG ATATGGCTAA AGGGGAAGTG GGTACTTTAC AAATAAACCG CACATGGATT TCATTATTTG ACTTGATAAA TGAGATAGCT TCTGTGCTTA GCCCCAGCCT TAACTCTAAA CAGTTAAGGC TTCATCTTTT CTTCAGGCCT CACTTACCCC CAGTATACGC AGATCAAAAC CGGCTTAAAC AGGTCCTTGT AAATTTGCTG AATAACGCAA TAACATTCAG TCTGCCCAAG AATAAAATCA CAATGATATG CGGTTTCAAT CAAAAATACG TAACCATTGA GATAATGGAC GAAGGCACAG GTATTTCAGA AGATGACCTG CATAAACTAT TTAAACCGTA TGTACTTACC AAATCAGATG GACTGGGCTT AGGTTTGGCC TTATCCAAGA AGATTATTGA ACTCCATAGC GGTAAAATAC GGGTTAAAAG CATCAAAGAT ACAGGCAGCA AATTTTCAAT CATACTGCCT GCCAATAATA CGGACTGA
|
Protein sequence | MRISKLNTSP GSTAERHQTR PVSRLNSLAT KYKMTRRMIN LNLYRQNKEQ KSQKLNCQKL YRKYKTIFDL SSDPIVIAEV KGTGPHDRMI VEINEAAIKH FGYSRSELLM HDTSFLHPPE EVDALLSWVG TEMNKNHHVF FEAKHLRKDG NVLDVEIHAT QIAIDNSPIS IAVIRDISER KSLEKRAIKL HQAEQKFRIE LESQIYQRTE FYKALVHELK TPLTPIVLNS EMLEDNLEGK HKKLADNIKL SSLELLARIN ELYDMAKGEV GTLQINRTWI SLFDLINEIA SVLSPSLNSK QLRLHLFFRP HLPPVYADQN RLKQVLVNLL NNAITFSLPK NKITMICGFN QKYVTIEIMD EGTGISEDDL HKLFKPYVLT KSDGLGLGLA LSKKIIELHS GKIRVKSIKD TGSKFSIILP ANNTD
|
| |