Gene DET0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0301 
Symbol 
ID3230338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp288484 
End bp289764 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content43% 
IMG OID637119868 
Productsensory box sensor histidine kinase 
Protein accessionYP_181049 
Protein GI57234869 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGC CTTCTTCAGA ACGGATCGGG ACAGCGGACT ATTGCAGCCA GATTGTCAAG 
ATAATGCAGC GCAACACTCT GGTCGGAATG GCTATTGTCG ATCAGAAGAT GCACCAGATA
ATCCACGTTA ATCAAGCTTT ATGTAAAATG CTTGGTTACC GTAAAAAAGA ACTCATTGGT
AAAACCATGT TCGATCTTAC TCACCCGGAT GATTTGGAAA TCAGCTATCA GCACGCCATG
AGAATCTGGG ATGACGAACA CTGCTATTCA AAGATTGTTA AACGTTATTC TAAAAAGGAT
GGCGGGTTCA TTTGGGCAGA ATCAGAGGGT TTCCTTTTGA AGGACAACTC CGATAACGGA
ATACTGAGTA TCACTTTTAT AAAAGATGTA ACCAGAGAAA TCTCCTTTTC GGCTGCAGCA
CCTGTCAACA TTTCCGGCAA CCCGGCCTTA TCCGGCCAGG AAAACCTCGC CATTGACGTA
AAAAAGCTAC TATCAGACGA AATCAATAAA CGCAAACTGG TCTATAACCA ACTACTGGCA
TCTTATGAGA ATGAAAAGAA ACTCCGGAAG TGCATACAAA CAGAAATGAA AAGCCGGCTG
GAATTTACCC GAATAGTAGT CCATGATTTG AAAACACCCC TTACTTCCAT AATCTCATCC
AGCGGAGTAC TCTCCAATAT AGCGGCTGAC GGTAAATATA AAGCGCTGGC TGCAAACATT
TACGAGAGCA CCATGAATTT AAATACCCGC CTTGACGAAC TACTGGATAT GGCCCAGTGT
GAAGTCAGAG ACCCCAAACT GAACCGAAGC CGCTTTAATA TTAAAGAAAT GCTTGACCAT
ATCATCTCCA TACAGCATGG TATGTACAAT ACCAACCATA TTGATTTCAA GATAATTATC
GCCCCGGAAG TAAGTTTTAT AATTGCTGAT GAGGACCGTT TAAGGCAAAT CCTGGACAAT
CTGATAGATA ACGCTATAAA GTACTCCCCA GATTCCGGAC TGATATCCAT TAATATCAGC
CGTGACCAGA ATAACGTTCT TTTCTCTGTT TCAGACAGCG GCATTGGGAT AGAACCGGGA
GAGATTAAAA ATATATTCAA ACCTTATTAC CGGGTGGAGA GCAGACAGAA AAAGCTGCAA
GGGCTGGGAC TGGGGCTCAG CATTGTACGA ACATACGTCA AACTGCATGG CGGACGTATC
TGGGTAGAAA GCGAATACGG GAAAGGCACT ACCTTCCTGT TTACCATACC TCAACCGCCT
TTAAAGGTAT CTTCGACATG A
 
Protein sequence
MKMPSSERIG TADYCSQIVK IMQRNTLVGM AIVDQKMHQI IHVNQALCKM LGYRKKELIG 
KTMFDLTHPD DLEISYQHAM RIWDDEHCYS KIVKRYSKKD GGFIWAESEG FLLKDNSDNG
ILSITFIKDV TREISFSAAA PVNISGNPAL SGQENLAIDV KKLLSDEINK RKLVYNQLLA
SYENEKKLRK CIQTEMKSRL EFTRIVVHDL KTPLTSIISS SGVLSNIAAD GKYKALAANI
YESTMNLNTR LDELLDMAQC EVRDPKLNRS RFNIKEMLDH IISIQHGMYN TNHIDFKIII
APEVSFIIAD EDRLRQILDN LIDNAIKYSP DSGLISINIS RDQNNVLFSV SDSGIGIEPG
EIKNIFKPYY RVESRQKKLQ GLGLGLSIVR TYVKLHGGRI WVESEYGKGT TFLFTIPQPP
LKVSST