Gene DET0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0251 
Symbol 
ID3230437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp240825 
End bp241478 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content39% 
IMG OID637119818 
Producttranscriptional repressor LexA, putative 
Protein accessionYP_180999 
Protein GI57234968 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00843575 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA AGTCATCAAT AGGTATAACG CTCAAAGAGT TACGCAAAAA AATAGGTATG 
ACGCAGAGTG AATTAGCCCG GAGATCAGGT GTAGATCGTG CCTACATATC CCAATTGGAA 
AGCGGGAAAA CATATAGTGC TACACTTGGA ATTGCGCAGA AGTTAGCGCG TGGACTTGAT 
ATTTCGACAT CAGCATTATT GGGTGAGAAA GAAGAATCTC TTGGTAATTT ATTAAGCCGC 
GCACAAGCAA TATCCAGAAG AATGGATGAT ATTGAATTCA TCCCAGTAAT TGGTTATATA 
CCCGCAGGAT ATCCGGAATT AGTAGATGAA GAGGCAGCAT CTGATTATGT TCCTGTCCCA 
AAGGAATTAT TAAAAAATGC GAGTAAGAGA GTGTATGCGT TGAGAGTGAG CGGTGAGAGC 
CTCAAAGGGG ATGGGATTGA AAACGGCGAT ATAATCATTG TTGATAAAGA TTCAGAGATG 
TTTGAAGGTA AAATTTATGC CGTTCGTACA GCGCATAATG AAGTGACTGC AAAACATCTA 
TATTTGAATA ATGGACAGAT TATTCTGCGG TCCTCAAATG GAGATTATAA AGATTTAGTT 
ATGACTAACG CTGATATATT GGGAAGAGTT ATTGCTTCTA TCAAAAGATT CTAA
 
Protein sequence
MEDKSSIGIT LKELRKKIGM TQSELARRSG VDRAYISQLE SGKTYSATLG IAQKLARGLD 
ISTSALLGEK EESLGNLLSR AQAISRRMDD IEFIPVIGYI PAGYPELVDE EAASDYVPVP 
KELLKNASKR VYALRVSGES LKGDGIENGD IIIVDKDSEM FEGKIYAVRT AHNEVTAKHL 
YLNNGQIILR SSNGDYKDLV MTNADILGRV IASIKRF