| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0246 |
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| Symbol | cobD-1 |
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| ID | 3230412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 236546 |
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| End bp | 237502 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637119813 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_180994 |
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| Protein GI | 57234943 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAT ATATCCTGAT ACTTATTCTG GCTGTCCTTT GGGATTTGGC TCTGGCTGAG
CCTCCGGCGG CTATCCACCT GACTGTCTGG ATAGGGCGGG TGATTTCGCT GGTGGAGAAG
GCAGGGCTTA AGATACGCAG TCGCGCCCTG CAGTATATCT TCGGCATGGC GGCCTCTTTG
TTCCTGATAG CTTTATTCGG CTGGCTGACT TATCTGCTGC TTGATTATCT GGGCGGCCTA
AGCTTTGCCT TATACCTGAT AGCCGCCTTT TTAATCCTGA AGACCACGTT CTGTTTACGC
TTTAACGCCC GCATGTCTTT ACTGGTGGAG AAATACCTGA AAGGCGGGGA CTACCGGATA
GAGAGTGCCG CCCCGGAAAT CCGCTATCTT CTGACAACGG TTGAACGTGA CAAGGAGGAC
GGATTTGCTC CGCCCATGAT ATCCTCCACC ATCCGTTCGC TGGCGGAAAA CGCTTCGGAT
TTTCTGGTAG CCCCTCTGTT CTATTTTCTG ATTCTGGGTG TGCCGGGGGC GGTGGCCTAC
CGGGTTTGCA ACACCCTGGA CGGTATGCTG GGACACCGCG GTGAGTACGA ATACCTGGGT
AAGTTTGCCG CCTGCCTGGA TGATATCATT AACTATCTGC CGTCCAGACT TACCGGGCTG
ATGTTTATAC TGGCGGCTTT TGTTTCGGGG ATGGATGGCC AAAACGCCTG GAGGATTGCC
CTCAGGGACC AGTCCAAAAC CGAAAGCCCC AATGCCGGCT GGCCGATGGC ATCTGTTGCC
GGAGCACTGG GGGTAAGGCT GGAGCGGGCT GGCCACTATG CGCTGGGGGA TGCGGCAAAA
CCCCTCAGCC CCGGTCACAT TGGTCAGGCC GTAAGGCTGT TCGGGGTGAT GTCCGCTATC
AGCATTGCCA TCAGTACGGG CATACTGCTG GCGGTATATT TAATAAGCTT GAACTGA
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| Protein sequence | MNEYILILIL AVLWDLALAE PPAAIHLTVW IGRVISLVEK AGLKIRSRAL QYIFGMAASL
FLIALFGWLT YLLLDYLGGL SFALYLIAAF LILKTTFCLR FNARMSLLVE KYLKGGDYRI
ESAAPEIRYL LTTVERDKED GFAPPMISST IRSLAENASD FLVAPLFYFL ILGVPGAVAY
RVCNTLDGML GHRGEYEYLG KFAACLDDII NYLPSRLTGL MFILAAFVSG MDGQNAWRIA
LRDQSKTESP NAGWPMASVA GALGVRLERA GHYALGDAAK PLSPGHIGQA VRLFGVMSAI
SIAISTGILL AVYLISLN
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