| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0235 |
|---|
| Symbol | |
|---|
| ID | 3230432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 226290 |
|---|
| End bp | 227762 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637119802 |
|---|
| Product | reductive dehalogenase, putative |
|---|
| Protein accession | YP_180983 |
|---|
| Protein GI | 57234963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TCCATTCTAC TTTATCAAGA CGTGACTTTA TGAAGGGGAT TGGGTTAGCT
GGTGCTGGCT TTGGTGCTGC TGCTGCTACA GCTCCGGTAT TCCGTGATTT GGATGAAGGT
GCTTCCATAG CCGCTAATAC TTATAAGAAA AATCCGTGGT GGGTCAAAGA GCGCAATTAT
TGTGACCCCA CGACTCCTAT TGACTGGGAT GTATGGAAAG CATTTGACGC TACTCATTAT
GACTACATCG GCGGACAGTA TTCTGAAGAG TATTTAGCTC AAATCGGTGT CCCTTCGGTA
CTCAATGAGA GTGTAGCAAA GAGGCACGAA CGTATAACTT CTCGTTTGGG CAAGCCTGGG
TTCTCCATGC AGGACTGGGC CTTTTGTCAG GGCGCTAAAA ATGTAACTTC TTCCATGTGC
TATAACGAAT TTGGTCAGAG TCGGTCCATG TTCTTGGGTG ACAAGAAAAT GATGGATGAA
GTGATGACCC CGGAACAGAT TGGTTTGTCC AAGTATGAAG GTACTCCTGA ATATAATGCT
CTTATGTTAA AAAGCGCTAT TCGCTTTTTG GGTGGTACAG ATATTCGGTG TTTACCAGTT
GATGACAAGA CTAAGAGGGT ATTGAACGTT GGGGAGAATC AGCATCCTGA CCAGCCCTAT
GTCTGGGAGG ATGGAATATC TTGGCCTTAT GAGACTATGA CCAAACGGGC TATTCCTACG
AAAGACGCCC ACATCTTAGT GTTCAGCTAT AACGGTTCAT TTGACGGTAC CGTACGCAGC
CCCTCCTGGA TATCTAACGG CGTTGCTTTT AATCAGTGTC TTTCAGGTGA TTCTATTCAG
CTTTACCTGC AACGCTTTCT AAAGGGTCTT GGCTACTGGC TGGTAGGCGG TGACGATTTC
CCCGGTATAG CCAGTTATCC AGGCGCAGGT GCGTTGTCCG GTTTTGGCGA AATTGGCCGT
ATTGGTCATG CTGTTGGTTG GGATAAATGG ATGCGCTGCA CCCGCCTGAT GGTAACTAAT
CTTCCTCTGC CGGCGGATAA CCCCATAGAT TTCGGGGTAG TTTCCTTCTG CACCACTGCC
TGCAAGAAAT GTGCCGAATT CTGCCCTGTC AGCGCTATCA AGATGGATTC GGAGCCCAGC
TGGGAATTGG CCACTGACCC CTCTAACCCG TACCTTAAAC CCCAGAATTT CAATAACCCC
GGCCGTAAGA CCTGGTATCT GAACCAGGCT GGTTGCTTCT CCAACTGGTG TTTGACTGAT
ACTTTCTGTG GTATTTGTAT GGGAGAATGC GTATTTAACA AACTGGCTGA TTCCAGTATC
CACGAGGTTG TTAAACCCGT TATTGCTAAT ACCACTTTGC TGGACGGCTT CTTCTTTAAT
ATGGATAAAG CCTTTGGCTA TGGCTGTCTG CCTGAAGATC AATGGGAAGA CTGGTGGACG
CTGGGCGAGA AGATGCCTAT ACATGGTATT TAG
|
|---|
| Protein sequence | MQNFHSTLSR RDFMKGIGLA GAGFGAAAAT APVFRDLDEG ASIAANTYKK NPWWVKERNY
CDPTTPIDWD VWKAFDATHY DYIGGQYSEE YLAQIGVPSV LNESVAKRHE RITSRLGKPG
FSMQDWAFCQ GAKNVTSSMC YNEFGQSRSM FLGDKKMMDE VMTPEQIGLS KYEGTPEYNA
LMLKSAIRFL GGTDIRCLPV DDKTKRVLNV GENQHPDQPY VWEDGISWPY ETMTKRAIPT
KDAHILVFSY NGSFDGTVRS PSWISNGVAF NQCLSGDSIQ LYLQRFLKGL GYWLVGGDDF
PGIASYPGAG ALSGFGEIGR IGHAVGWDKW MRCTRLMVTN LPLPADNPID FGVVSFCTTA
CKKCAEFCPV SAIKMDSEPS WELATDPSNP YLKPQNFNNP GRKTWYLNQA GCFSNWCLTD
TFCGICMGEC VFNKLADSSI HEVVKPVIAN TTLLDGFFFN MDKAFGYGCL PEDQWEDWWT
LGEKMPIHGI
|
|---|
| |