| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0232 |
|---|
| Symbol | |
|---|
| ID | 3230435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 222756 |
|---|
| End bp | 223439 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637119799 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | YP_180980 |
|---|
| Protein GI | 57234966 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.156156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC TGTTAATTGA AGACGATGCC GAAATAGTTG ATGTCATATC TACCATATTT
CAGATAAGCT GTCCAAATTC ACGGGTAATT TCTGCGTCAA GCGGCCGAAA GGGGATAGAA
TCTGTTGAAT CAGTAAACCC TGATATTATT TTGCTGGATT TGGGGTTACC TGATATGAAC
GGTTTTGATG TCCTGAAGCA AATCCGCAAC TTTTCAGATG TACCCATTAT TATTCTGACG
GTACGCGGAG ATGAGAGTGA TGTTGTTCGG GGTTTAACTC TGGGTGCTAA TGATTATATT
ACCAAGCCAT TCCGCCAGAT GGAGCTGCTG GCCAGAGTCC GGCGCTTATT GACTAAAAAA
CAGATAAACG GTGAAGACCT GTCCGTCACT TGCGGCAAAA TGCATTTCGG TTCGTCAATC
AGGGAATTAT GGATAGGCGA TACCCTCATA AATCTGACTG TCAGCGAAGG CCGCATTATG
TATATGCTGA TGAAAAACCA TGATAAAACA GTGAGCTACG AAGAGCTATC TGAATTACTC
TGGGGGGATT ATTACCCGGA AGCCCGCAGC AATCTTAAAA CCCACATCTT AAGGTTACGC
AATAAGATAG AGGAGAACGC ATCTAATCCC AAACTTTTAA TTAACAGCCC GAATCGCGGA
TATATTTTAA AGACTACTGA TTAA
|
|---|
| Protein sequence | MKLLLIEDDA EIVDVISTIF QISCPNSRVI SASSGRKGIE SVESVNPDII LLDLGLPDMN
GFDVLKQIRN FSDVPIIILT VRGDESDVVR GLTLGANDYI TKPFRQMELL ARVRRLLTKK
QINGEDLSVT CGKMHFGSSI RELWIGDTLI NLTVSEGRIM YMLMKNHDKT VSYEELSELL
WGDYYPEARS NLKTHILRLR NKIEENASNP KLLINSPNRG YILKTTD
|
|---|
| |