Gene DET0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0216 
Symbol 
ID3230466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp209328 
End bp210161 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID637119783 
Producthypothetical protein 
Protein accessionYP_180964 
Protein GI57234996 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTACTTGG CGGCTATATT TTCTAAACTG ATAAAGATGA ATTATTTTAA AAAGAAACGG 
TCAGGACTGC TTTTCAGCCT GATGTTTATC TGTCTGGCAG GTGTTACTTT TTTCTTCTGG
GCGGTGCCGG ATGTGCTTGG CCAGCAGTAT ATTAAACAGC TGGATTACTT GCCTTCACCC
CAGGCAGGCG AAAAGATACT TATATTTTCA CCCCACCCGG ATGATGAGAC TATTGCTTTG
GGGGGATATA TTGCCAGTGC CTGTCAGGCC GGTGCCGAGG TGGAAATTGT GCTGGTTACC
GATGGCAGCA AGTTCGTAAA TAAAGATATC CGCTACCAGG AGTTTGAGAA TGCCTGCCGT
CTGCTGGGGG TACCGGCGGA TAATCTGGTG TTTTTAGGCT TTAAAGACGG CAGTCTCCAG
TCAGTGCCGC TTACCCGCCT GGTAGACTCA TTTAATCTTT TGATAAATGA ATTTTCACCG
GATATTGTAT TTTATCCCCA TCACAAAGAT GCCCATGATG ACCACGCGGC CATAAGCAGG
GCAGTGGGGC AGTCTTTGAA AGTGAGTCCC GGCATCCGGT GTTACGAATA TCTGGTGCAT
TACCGGATTT TCTTCCCCCA GCCGCGGGTT TATAATTCTA ATCTGTATCT GTTGCCCCCG
CTTACGCTGG TAAATGAAGA CCAGAACTGG CTTCGGTTTG ACCTTTCTGA AGGAGTATTG
GAGCAGAAAA CGCTGGCCTT GGAAGCTTAT GAGAGCCAGC TGAAAAATCC ATTCCTTAAG
CCTCTTATCC AGAGTTTTAT CCGCCAGAAT GAGCTGGTTT GCCTGCCGAA TTAG
 
Protein sequence
MYLAAIFSKL IKMNYFKKKR SGLLFSLMFI CLAGVTFFFW AVPDVLGQQY IKQLDYLPSP 
QAGEKILIFS PHPDDETIAL GGYIASACQA GAEVEIVLVT DGSKFVNKDI RYQEFENACR
LLGVPADNLV FLGFKDGSLQ SVPLTRLVDS FNLLINEFSP DIVFYPHHKD AHDDHAAISR
AVGQSLKVSP GIRCYEYLVH YRIFFPQPRV YNSNLYLLPP LTLVNEDQNW LRFDLSEGVL
EQKTLALEAY ESQLKNPFLK PLIQSFIRQN ELVCLPN