| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0183 |
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| Symbol | |
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| ID | 3230538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 175537 |
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| End bp | 177219 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637119750 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_180931 |
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| Protein GI | 57235067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.475928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCG AATCTTTCAA TTTTGCTCCG GCTGTTATGG CCGGGGTCAG GGCTTGCGGT
TATCAAGAGC CCACCCCCAT TCAGGCCCAG GCTATTCCCC CTATTTTAGA GGGGCATGAT
GTTATTGGTC TGGCCCAAAC AGGTACTGGC AAAACCGCGG CTTATGCTTT ACCCGTTATC
CAGAAAATGC TTTCTACCCC CAGGGGGCGG GTACGTACTT TGGTGCTGGC GCCTACCAGA
GAGCTGGCCT GCCAGATTGC TGAGAGCTTC CGCTCGCTGG GTCAGCGCGC CCGCATCCGG
GAGTGCTCTA TCTACGGCGG GGTTAATATG GACCAGCAAA TCCGCCGCTT ACGGAGCGGG
GTAGATGTGG TAGTGGCTTG CCCCGGCAGG CTTTTAGACC ATATCTGGCG GGGAACTATT
GATATTTGCG GGGTGGAGAC CCTGATTATA GACGAGGCTG ACCGCATGTT TGATATGGGT
TTCCAGCCGG ATATCCAGAG TATTTTGAAA TGTCTGGTTC AGCCGCATCA GACCCTTTTA
TTTTCAGCCA CCATGCCGCC GGAAGTCCGC AAGCTGACCT TGGAAACCCA GACTAATCCG
GTAACTATCC AGATTGGTAC TCAGGCTCCG GCAAGCAGTG TCAGCCACAG TGTTTATCCG
GTGAAAAACC ATCAGAAAAC CCCTTTGCTG ATTGAAATTC TGAAAACAAC GGAAACCAAG
TCTGTTTTGA TATTTGCCCG CACCAAGTAC GGGGCGGAAA ACCTGGCTGA TGAAATATCC
AGAGCCGGTT TTACTACTGC ATCTTTGCAG GGCAATCTTT CCCAAAACCG CCGCCATGCC
GTCATGGAAG GCTTCCGCCG GGGGAATTTT AAAATTCTGG TGGCTACCGA TATTGCCGCC
AGGGGTCTGG ATATTGACCA TATTTCCCAC GTGATAAATT ATGATATGCC GGATACCCCT
GAAGATTATA CTCACCGTAT CGGACGGACC GGGCGTTTTG ACCGCACCGG GCAGGCCCTC
AGCCTGGTGA CCGGGCGTGA TGGTGATATG GTAAGGGATA TTCAAAAACT GATAAACAGC
CCAATCCAGC GCCTCCGGGT TGATGGGTTT GATTATGCCA CCACCCGTAA TGACGGGCAG
AACCATTCGC AGCGCCGGGG CTTTGCTCCC CGCCGGGGTT ATTCGGCTGA GGGTTATAAC
CGCTCTGAAA TGCCTGCAGC TGAAACTTCA CCAAATAGTC TTACGGCTGA AATGCCCTCA
GGCAATGTCA GGCCGTTTAG TCAGGCTGTC CGTTCCGGAC GCCCGGCTGA TTCCGCCCCC
CGTTTCCGCC GGGAAGGGTA CTCTGCCCCC CGCTTTGGGG GACGCCCTTC GTTTGAGGAT
GCCCCTATGG CAGCTAAGCC TGTAGCCAGG TTTAATGCCC GTCCTGCTTT CAGGAAAGAG
GATGATGCTC AAGCTGCGGC TAAAGCCTAC CCTTCATTTG GCAGGGAAAC CGGAGTGACT
TCGGCTGAAA ATACCCGGTC TGTTTCTGAA AACCCGGAGC AGTTTTCAAG CCGCCGTCCG
GCCCGCTTTA ACGGCAAAGC TTCTTTTGCA AACCGCCCGG CCCGGCCGGG GAATAAAGTG
GGAAAACCGC CCTTCTTCAG GCGTTCAAAA CCGCCTGTTT CAGAGAACAA CCCAACTTAT
TAG
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| Protein sequence | MSFESFNFAP AVMAGVRACG YQEPTPIQAQ AIPPILEGHD VIGLAQTGTG KTAAYALPVI
QKMLSTPRGR VRTLVLAPTR ELACQIAESF RSLGQRARIR ECSIYGGVNM DQQIRRLRSG
VDVVVACPGR LLDHIWRGTI DICGVETLII DEADRMFDMG FQPDIQSILK CLVQPHQTLL
FSATMPPEVR KLTLETQTNP VTIQIGTQAP ASSVSHSVYP VKNHQKTPLL IEILKTTETK
SVLIFARTKY GAENLADEIS RAGFTTASLQ GNLSQNRRHA VMEGFRRGNF KILVATDIAA
RGLDIDHISH VINYDMPDTP EDYTHRIGRT GRFDRTGQAL SLVTGRDGDM VRDIQKLINS
PIQRLRVDGF DYATTRNDGQ NHSQRRGFAP RRGYSAEGYN RSEMPAAETS PNSLTAEMPS
GNVRPFSQAV RSGRPADSAP RFRREGYSAP RFGGRPSFED APMAAKPVAR FNARPAFRKE
DDAQAAAKAY PSFGRETGVT SAENTRSVSE NPEQFSSRRP ARFNGKASFA NRPARPGNKV
GKPPFFRRSK PPVSENNPTY
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