Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0180 |
Symbol | |
ID | 3230541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 173382 |
End bp | 174749 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637119747 |
Product | reductive dehalogenase, putative |
Protein accession | YP_180928 |
Protein GI | 57235070 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGAA AAATAAACCG CCGTGATTTT GTAAAAGGTG CGGGTATTGC ATCTGCTGCC ACCGTTGCCA CTATCATGGC AACAGCTTCA ACTGTATCCG CTGAGGAACT GGTTAATCCG AGTATCAAAG CTATGGATGA AATGGGAAGT GCCTCCCTTA CCCGGGACCT GCCGGAAAGT TTTTACAAAA GAATTGAAAA CAAGGACGGC TATATAGGTA CTACCAGAGT TATTGCCCCT ACTCAAAGAC TTGATGCCCG TGAACATGGT TTTTCCCAGA TAGTCCGGCG CGGCTCAACC GGTGACTGGT CAGGTGAACC CGGAGACTGG GGACCGGTGC TGTTTGCGGC TGTTCAGGAA AAAAAGAAAC ACGCAGCTGA AATTACCCCT TTGGAAGCGG CTGATTATAC CTGGAGTAAT GCTTTCCAGA TTGCTATGGA CAGGTGGCAT ATTACCCTTG AGCCGGGTCG GTATCAGCAG GCACCTATAG CCGCCACTAA GGTTGAGCTT TCTCCCGAAG AAATGACAGC CCGCATAAAG AAAATCTGCC GCTGGTTTGG CTGTGAGCAG GTGGGTATCT GCGAAGTAAC TGAAGATATG AAACCTTTCT TCTACAGCGT TGGCAGAACC AAGGGTACTT ATACCACCGG ACATGCGAAT TATGTAGATG AGGGCCGTGA AATACCCTGG CCGTATCCCT ACAAATACTG CATTGTCATG GCTGACAAAT GTGATACCGA TACTCTAAGT GCCATGACCG GACCTCTGGT TGAGGCCAGT GCCAAAATAG CCTGTTCCCA ATCGGACTTT GCTCCCCATT ATCTGGAATC CATAATCCGC TCACTGGGAC ATGATGCTAA GGCCAATATC TTTAGCGATA CTGATATTAT GGATACCCCC TTTGCAGTCA AAGCCGGTCT GGGTGAACTG GGCAGGAGCG GCCTGGTGAT TTCACCCTGG GGCGCCCAGA TGAGAATCAT GGAAGTCTTT ACCAACTTGC CGCTGGTTCC GGATAAGCCC ATAGATTTTG GCCTTCAGGA ATTCTGCAAG GTCTGCAAGA AGTGTGCTGA TAATTGTCCT GCCAGTGCTA TTTCCATGGA TGACGAACCC AGCGAAGTGG ATACGGTAGT CAAGTCTATC CGCTGGTTCC AGGATGGCAA AAAATGTTTG TCCCAAAGGT TGGCTTATGG CTGTTCCAAG TGCCAGAGCG TCTGCCCCTG GTCTAAACCT GATACCCTGA TTCACGAAAT AGGGCGTATG GTAGGCCAGA ACCCGGCCTT TGCCCCGTTC CTGGTTAAGC TGGATGACTT CTTCTATAAC CGCTATCCTG AAGGGCATGC AACCGGTGAA TGGGCTCCCT GGAGATAG
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Protein sequence | MDGKINRRDF VKGAGIASAA TVATIMATAS TVSAEELVNP SIKAMDEMGS ASLTRDLPES FYKRIENKDG YIGTTRVIAP TQRLDAREHG FSQIVRRGST GDWSGEPGDW GPVLFAAVQE KKKHAAEITP LEAADYTWSN AFQIAMDRWH ITLEPGRYQQ APIAATKVEL SPEEMTARIK KICRWFGCEQ VGICEVTEDM KPFFYSVGRT KGTYTTGHAN YVDEGREIPW PYPYKYCIVM ADKCDTDTLS AMTGPLVEAS AKIACSQSDF APHYLESIIR SLGHDAKANI FSDTDIMDTP FAVKAGLGEL GRSGLVISPW GAQMRIMEVF TNLPLVPDKP IDFGLQEFCK VCKKCADNCP ASAISMDDEP SEVDTVVKSI RWFQDGKKCL SQRLAYGCSK CQSVCPWSKP DTLIHEIGRM VGQNPAFAPF LVKLDDFFYN RYPEGHATGE WAPWR
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