Gene DET0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0180 
Symbol 
ID3230541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp173382 
End bp174749 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content50% 
IMG OID637119747 
Productreductive dehalogenase, putative 
Protein accessionYP_180928 
Protein GI57235070 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGAA AAATAAACCG CCGTGATTTT GTAAAAGGTG CGGGTATTGC ATCTGCTGCC 
ACCGTTGCCA CTATCATGGC AACAGCTTCA ACTGTATCCG CTGAGGAACT GGTTAATCCG
AGTATCAAAG CTATGGATGA AATGGGAAGT GCCTCCCTTA CCCGGGACCT GCCGGAAAGT
TTTTACAAAA GAATTGAAAA CAAGGACGGC TATATAGGTA CTACCAGAGT TATTGCCCCT
ACTCAAAGAC TTGATGCCCG TGAACATGGT TTTTCCCAGA TAGTCCGGCG CGGCTCAACC
GGTGACTGGT CAGGTGAACC CGGAGACTGG GGACCGGTGC TGTTTGCGGC TGTTCAGGAA
AAAAAGAAAC ACGCAGCTGA AATTACCCCT TTGGAAGCGG CTGATTATAC CTGGAGTAAT
GCTTTCCAGA TTGCTATGGA CAGGTGGCAT ATTACCCTTG AGCCGGGTCG GTATCAGCAG
GCACCTATAG CCGCCACTAA GGTTGAGCTT TCTCCCGAAG AAATGACAGC CCGCATAAAG
AAAATCTGCC GCTGGTTTGG CTGTGAGCAG GTGGGTATCT GCGAAGTAAC TGAAGATATG
AAACCTTTCT TCTACAGCGT TGGCAGAACC AAGGGTACTT ATACCACCGG ACATGCGAAT
TATGTAGATG AGGGCCGTGA AATACCCTGG CCGTATCCCT ACAAATACTG CATTGTCATG
GCTGACAAAT GTGATACCGA TACTCTAAGT GCCATGACCG GACCTCTGGT TGAGGCCAGT
GCCAAAATAG CCTGTTCCCA ATCGGACTTT GCTCCCCATT ATCTGGAATC CATAATCCGC
TCACTGGGAC ATGATGCTAA GGCCAATATC TTTAGCGATA CTGATATTAT GGATACCCCC
TTTGCAGTCA AAGCCGGTCT GGGTGAACTG GGCAGGAGCG GCCTGGTGAT TTCACCCTGG
GGCGCCCAGA TGAGAATCAT GGAAGTCTTT ACCAACTTGC CGCTGGTTCC GGATAAGCCC
ATAGATTTTG GCCTTCAGGA ATTCTGCAAG GTCTGCAAGA AGTGTGCTGA TAATTGTCCT
GCCAGTGCTA TTTCCATGGA TGACGAACCC AGCGAAGTGG ATACGGTAGT CAAGTCTATC
CGCTGGTTCC AGGATGGCAA AAAATGTTTG TCCCAAAGGT TGGCTTATGG CTGTTCCAAG
TGCCAGAGCG TCTGCCCCTG GTCTAAACCT GATACCCTGA TTCACGAAAT AGGGCGTATG
GTAGGCCAGA ACCCGGCCTT TGCCCCGTTC CTGGTTAAGC TGGATGACTT CTTCTATAAC
CGCTATCCTG AAGGGCATGC AACCGGTGAA TGGGCTCCCT GGAGATAG
 
Protein sequence
MDGKINRRDF VKGAGIASAA TVATIMATAS TVSAEELVNP SIKAMDEMGS ASLTRDLPES 
FYKRIENKDG YIGTTRVIAP TQRLDAREHG FSQIVRRGST GDWSGEPGDW GPVLFAAVQE
KKKHAAEITP LEAADYTWSN AFQIAMDRWH ITLEPGRYQQ APIAATKVEL SPEEMTARIK
KICRWFGCEQ VGICEVTEDM KPFFYSVGRT KGTYTTGHAN YVDEGREIPW PYPYKYCIVM
ADKCDTDTLS AMTGPLVEAS AKIACSQSDF APHYLESIIR SLGHDAKANI FSDTDIMDTP
FAVKAGLGEL GRSGLVISPW GAQMRIMEVF TNLPLVPDKP IDFGLQEFCK VCKKCADNCP
ASAISMDDEP SEVDTVVKSI RWFQDGKKCL SQRLAYGCSK CQSVCPWSKP DTLIHEIGRM
VGQNPAFAPF LVKLDDFFYN RYPEGHATGE WAPWR