| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0170 |
|---|
| Symbol | |
|---|
| ID | 3230558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 165258 |
|---|
| End bp | 165956 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637119737 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | YP_180918 |
|---|
| Protein GI | 57235087 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC TAATAATTGA GGATGATGCC CAAACAACCG AAATTGTGAA GCTGTCTTTT
AAACTCGGCT GGCCGGATGT GCGTTTGCTG GAAGCCAGTT CCGGTGAAAG CGGCCTGGCC
ATGGTGGAAA CAGCCAAGCC TGATGCCATT ATTCTTGATA TCGGCTTGCC GGATATCAGC
GGCTATGAAG TGCTAAGGCA AATCCGGCTC TTTTCTGAGT TACCGGTGAT TATTCTGACT
ATTCGGAATG AGGAGAGCGA CATTGTGAAG GCACTTTCCC TGGGAGCGGA TGATTACCTG
GTCAAACCAT TCCGCCAGAT GGAGCTACTC GCCCGTATCA AAGCTATAAG CAGGCGTTTG
CATTCACCCG AAGTTGATTT GGAATTTGAA TGCGGCCCAT TCCATTTCGG CCAGTCAGTA
ACCAAACTCT ATAAAAATGA CAAACCCATA CGCCTGACAA ATATAGAGGG GCAGATACTG
TATTACCTGA TGCGTTCCAA CGGACGTTAT ATTTATAATG AAACGATAGC TCAAAAAATC
TGGGGGGAAA ACGCTTACGA GAGAATAAGG GTAAATATAA GACATTTGCG GGAAAAAATT
GAAGACAACC CTTCCAACCC CAAGTTTCTT ATAAATATAC CCGGCAAAGG GTATATGTTT
ATCTGCCAGG ATTCGCCCAA AGCGGAATCT TCTTCCTAA
|
|---|
| Protein sequence | MKILIIEDDA QTTEIVKLSF KLGWPDVRLL EASSGESGLA MVETAKPDAI ILDIGLPDIS
GYEVLRQIRL FSELPVIILT IRNEESDIVK ALSLGADDYL VKPFRQMELL ARIKAISRRL
HSPEVDLEFE CGPFHFGQSV TKLYKNDKPI RLTNIEGQIL YYLMRSNGRY IYNETIAQKI
WGENAYERIR VNIRHLREKI EDNPSNPKFL INIPGKGYMF ICQDSPKAES SS
|
|---|
| |