| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0155 |
|---|
| Symbol | |
|---|
| ID | 3230459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 149100 |
|---|
| End bp | 150632 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637119723 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_180904 |
|---|
| Protein GI | 57234989 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTG TTCTTTACGC CAGGGTAAGC TCGGAAAAAC AGGACGTCGA TCTGTCGTTG
TCAGCTCAGT TGAAAGCGAT GAGATTGTTT GCTCAAGGTC GAGAGTATCA GGTGTTGCGC
GAATATATTG ACGAGGCCGA GACTGGCCGG ACGACTGCCC GTCCGGCCTT CAGGGAAATG
ATCGTCGCTG CTCGACGGCC TGGTAAGCCA TTTGAAGCTA TCCTCGTCTG GAAATACTCG
CGCTTTGCCC GAAGCCGGGA GGATTCGATC GTCTACAAGA CGATGCTTCG TAAAAATGGC
GTCCAAGTAA TCTCGATTAA TGAACCCACT GAAAATACCC CGGTCGGCAG ACTTATGGAG
GGCATGATCG AGGGACTCGA TGAATTCTAC TCTGATAATC TTGGGGAAGA GGTAACCCGC
GGTATGAGGG AAAGCGCTTC CCGAGGTTTC TACCTTTCCT ACAGGGCACC CTACGGCTAC
TCCAAAGTCA AAGTGGCCGA TGGCGGCAAG ATCAGGACGA AACTTGAACT TGATCCGGTC
CGGGCACCAA TCACACACTC TATCTTCAAG TCGGTGATTT CGGGTAAAGG TGTCGTCGAG
GTGGCGAGGG AATTGAATTC CAAAGGTATT GCGAGTGCCA AAGGGAAGAG CTGGACAAAG
GGCACTATCT ATTCGATGCT CAACAATGAA CTCTACACCG GTACCGTGGT ATGGGGTAGA
AACTCAAAGC GCGGCCTGGA ACCAATTAAG GTAACCGGCG CTTGCCCCGC TATCGTCGAT
ATCGAGACCT TTGACGCTGT TCAACAGATG ATGGCCTCAC GGGCTCCGAA ACTCATTCAC
CCCAGAGTCG TTTCCAGCCG GTTTCTCCTA AGCGGGCTTG CCAGGTGCGG CTATTGCGGA
CGCTCACTCA CCGGTCAGGA TGCCAAGAGT GGCAAATTTG CCTATTACGT CTGCGGCAGC
CTGACCAAAA AAGGAGCTGG ATCATGTGAT TTCAAGTACC TTAACGCACC CAAGTTTGAA
AAGGCGATCA TCGATGAAAT CAAGAAATCC GTCCTGACCA AAGAAAATCT TCTGGACCTA
GCCAAGGCTG TCACTGAAGA GTGGAACGAG TCCCTTACTG GTTTCAGGCA GGAGATCGAT
TCCATTGATG ATAGTATCAA GGACACTCAG TTTCGGCTGT CAAACATCTA CGACGCAATA
GAATCGGGGA AAATCGAACT ATCCGATCTG GCGCTAAGGA TCAAGGAACT CCGAATGCGT
CAAGAAAAGC TTATAGCTCG AAAAAGTGAA ATCGAAGCGC AATATTCCGA GCATCGTTAT
GAAATCATGG ATCCGGCGCA GATGGCTGTA TATGTGGAGG ATTTGAAGGC TCTCTTAGAT
GAGGGTGAAG TATGTGAGCG GAAGGCTTTT ATCAAAGGCT TCGTAAAAGG AATCCGAGTC
AAGGGTGATG AGGTCACCGT CGAATACACA CCGCCGTTAC CGGATGGAAC AGGGGAATCG
GTTCTGTCTA TTGAAGGTCA TGGTGGGCGG TAG
|
|---|
| Protein sequence | MKVVLYARVS SEKQDVDLSL SAQLKAMRLF AQGREYQVLR EYIDEAETGR TTARPAFREM
IVAARRPGKP FEAILVWKYS RFARSREDSI VYKTMLRKNG VQVISINEPT ENTPVGRLME
GMIEGLDEFY SDNLGEEVTR GMRESASRGF YLSYRAPYGY SKVKVADGGK IRTKLELDPV
RAPITHSIFK SVISGKGVVE VARELNSKGI ASAKGKSWTK GTIYSMLNNE LYTGTVVWGR
NSKRGLEPIK VTGACPAIVD IETFDAVQQM MASRAPKLIH PRVVSSRFLL SGLARCGYCG
RSLTGQDAKS GKFAYYVCGS LTKKGAGSCD FKYLNAPKFE KAIIDEIKKS VLTKENLLDL
AKAVTEEWNE SLTGFRQEID SIDDSIKDTQ FRLSNIYDAI ESGKIELSDL ALRIKELRMR
QEKLIARKSE IEAQYSEHRY EIMDPAQMAV YVEDLKALLD EGEVCERKAF IKGFVKGIRV
KGDEVTVEYT PPLPDGTGES VLSIEGHGGR
|
|---|
| |