Gene DET0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0127 
Symbol 
ID3230515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp125140 
End bp128325 
Gene Length3186 bp 
Protein Length1061 aa 
Translation table11 
GC content49% 
IMG OID637119695 
Productsensory box sensor histidine kinase 
Protein accessionYP_180877 
Protein GI57235045 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACC AGCAATCCCC CCCTCTTTTC AAAGATAAAT ATTTTACATA CGTCACCGGC 
TTATCCGTAC TGGTAATCAT CTTAGGATTA TACTCAGTCT TATCCCCGCA GGACTTCGTT
CAAAATGCCA ACTGGAAGCT TTTTGCCACT ATGGTGGAGG CATCTACTAC CATTATTATT
ATCGCCATTG CCACCTGGCG CTGGGGATTA AAAGTTTCCA TAATCTGGGT CAGCAGCATC
CTCATACCGG GTATGCTGCT GATGGTTGGA ATGGACTTGT TTGAGCCGGT TATTTTCTTC
GTTATGCTGC TAACTTTGGG TGCCGGCAGT CTGGTAGGGC TGATAATCAA CAACCACCGG
CGGGTAATAA GCCACGAAGA AGAACTCAAC CAGATACTCT CCATGATACG GGATATAAAC
CACCATATCA CCCATATAGA CAACGAAGAA GAGCTGATGG AAAGGGTGTG CGAAAGACTG
GTCTATGCCG GGCGGTATCA GGTAGCCTGG ATAGGTTATG CAACCCCTGA CCAGCAGACA
GTTGAACCCC GCTATCACGC TGCCAGCGGA CAGCCGTCCC AGCTTCCCGC CGGGGAGTGC
CCGGCACCGC ATTGCCTCTA CCTGCCCGGA GAACCTATCC AGCAGGCTAT AAAAAGCCGC
AGCCTGATAG TAGTTCCAGA CATCCAGACC TGCCCCGGTG ATGATATCTG CTGTCAGCAT
TGCTGCAGCC TGCTTTGTTC GCCTATTGAT TTCGGGGATG AACTGCTGGG GGTATTATGC
GTTTATTCAA ATAACCCGGA CGTATTCGGC AGAGAAGAAA TTTCCCTGCT GCGGGAGGTC
TCCCAGGATA TATCGCTGGG GGTGGAAAAA ATACGCCACC GGCAAGAACT GGCCAGAACT
GAAATCCGGC TGAAAGAAGA ACGAGACAAA GCCCAGTTGT ATTTGGATAT TGCCGGGGTA
ATTATAGTTG TCTTAAGCGA AAACGAGATT GTTTTACAGA TTAACAAGCG GGGCTGCGAA
ATACTGGGTT ATGAATATCA GGAAATTGTG GGGCGCAACT GGTTTGAGAG TTTTGTGCCC
GGTTACCGCC GTCTTATCAA ACACTCCATG TACAAACAAA TTATCTCAGG CAAAGCCGAC
CTGCCGGAAC GCTATATGGA TGTAGTCCTG ACTAAAGACG GCCAGGAAAA GGTGATTTTG
TGGCATTCCA CGGCTATCCG CAGCCAGGAC GGAAAACTTA ATTCAATACT CTATTCGGGT
GAAGACGTCA CCGAGCTTAA ACATATTGAA GAAGCTTTGC GTATGTCCGA GGAAAAGTAC
CACACCCTGT TTGAAACTAT GGCCCAGGGG GCTATTTATA TTGATGATAA GGGCATCATA
ATTGAAACCA ACCCGGCCGC CAATACTATT TTCGGCAGGC ATGAAAGCGA ACTGCTGGGA
ACAAATATTG CCGACCCGGT CTGGACTTAT GTGCAGGAAA ACGGCTCAAT AATGCCGCCG
GAGGAAAACC CGGTAATAAC TGCCCTGAAG ACCGGCAAAG CGGTGCGGAA TGTTTTTATG
GGCATAAAGA ATAACCTTTC CGGTGAGGTC CGCTGGGTCA ACCTGTTTGC CCTGCCGCTG
TTCCGCCTCA ACCAGGAAAA CTCGTACATG GTTTATACCA CCTTCACAGA TATAAGCCGT
CTGAAAAATG CCCGTGATGC CCTTACCCGC AGTGAAAACC GCTACCGCTC TATATTTGAA
ACAGCCGCCA GCATTATTAT TTCGTTTGAC CAGAACGGTA TTATAAATGA CTGCAATATG
CGTGTTCAGG AAATACTGGG CTATACTCCG GCCGAACTGG TGGGGATGAG CTTTCTGGAA
ATTGTGGAAG AACCCTTCCG CCATGAAGTC CGCAGGCATA TTGCCAGCCT AAACCGCGGG
GAAATTATTT ATAACAAGGA TTGCCGTATG CTCCACAAGG ACGGCAAGTA CCGGGATGTA
ATGGTAAACT GCTCTACCCT GCTTGATGAA AACGGCAGCG TAACGAATGC TATCTGCATT
ATCTCTGATA TTACCGAACA GAAACAGACC CATAATGCCT TGATAGCCTC GGAAGAAAAA
ATCCGGGGAA TGTTCAACGG GGTTAACGAA GGCATAATTG TCATGGATAC CCAAGGCTAT
ATTACCGAGG TCAACCAGAC TATACTGAAA ATGAATAACT ACACCAGCAA AGACCAGATG
ATAGGCAGAC ACGGGCTGGA ATTTATTGCC CCCAAAGACC GTGAAGAAGC CAGAGCCTAT
CTGGCCCAGG CAGACAGCCT GAATGAAGTA CGCAATCTGG AACTTCTGTG TGTACGCCCG
GACGGAACGG AATATTTCTG CCAGATAAGC GGAGCGGTAC TGCGTGATTA CTCAGGTGAA
ATCCAGGGCA TAATAATACT CAGTGCGGAT ATTACCGAAC ACAAGAAACT GGAACAGCAG
CTTATCATGA CTGACCGCAT GGCCTCAGTA GGCGAGCTGG CTTCCGGTCT GGCCCACGAG
ATAAACAACC CCCTTACCGG CATTGTCGGC TTCAGCGAAC TTTTGCTGAT GAATGAACTG
GAAGAATCAA TCAAAGAAGA TGTCCAGACT ATTCACCGCG AAGCCCTGCG GGCGGCTGAA
GTAGTCCGCA ATCTGCTCAC TTTTGCCCGT CAGCAAACCC CTACCCGCGA AGCCGGTGAT
ATAAACCTGA GCATTCAGAA GGTGCTTGAA CTGCGCAAAC ATGACCACCG GATAAATAAT
ATCCGCTGCA TAACCGAACT GGACCCCGAC CTGCCGCGGG TAATGCTGGA CGTCTTCCAG
ATACAGCAGG TTTTAATAAA TATTATTATC AACGCAGAGT TCTTCCTGCG CCTTAAGGAA
CACCCCCAGA TAACCATAAA AACCAGCCGC CGCAAAGGTT ATGCAGTAAT CAGTATTTCA
GATAACGGCC CCGGCATCAG CCCTGAAAAC ATCAAACGTA TTTTTGACCC TTTCTTTACC
ACCAAAGAGG TCGGTAAGGG TACCGGACTG GGGCTTTCCA TCTGCCATGG CATTATTGAG
GAACACCATG GCAGAATATC AGCGGAAAGC ACCCCCGGCA ACGGGGCTAC TTTCCGTATA
GAACTGCCGT TTGCGGATAT TAAACCGGCC TCAACCGCTG ACAGCATCAG CCCAAGCACC
GGTTAA
 
Protein sequence
MKNQQSPPLF KDKYFTYVTG LSVLVIILGL YSVLSPQDFV QNANWKLFAT MVEASTTIII 
IAIATWRWGL KVSIIWVSSI LIPGMLLMVG MDLFEPVIFF VMLLTLGAGS LVGLIINNHR
RVISHEEELN QILSMIRDIN HHITHIDNEE ELMERVCERL VYAGRYQVAW IGYATPDQQT
VEPRYHAASG QPSQLPAGEC PAPHCLYLPG EPIQQAIKSR SLIVVPDIQT CPGDDICCQH
CCSLLCSPID FGDELLGVLC VYSNNPDVFG REEISLLREV SQDISLGVEK IRHRQELART
EIRLKEERDK AQLYLDIAGV IIVVLSENEI VLQINKRGCE ILGYEYQEIV GRNWFESFVP
GYRRLIKHSM YKQIISGKAD LPERYMDVVL TKDGQEKVIL WHSTAIRSQD GKLNSILYSG
EDVTELKHIE EALRMSEEKY HTLFETMAQG AIYIDDKGII IETNPAANTI FGRHESELLG
TNIADPVWTY VQENGSIMPP EENPVITALK TGKAVRNVFM GIKNNLSGEV RWVNLFALPL
FRLNQENSYM VYTTFTDISR LKNARDALTR SENRYRSIFE TAASIIISFD QNGIINDCNM
RVQEILGYTP AELVGMSFLE IVEEPFRHEV RRHIASLNRG EIIYNKDCRM LHKDGKYRDV
MVNCSTLLDE NGSVTNAICI ISDITEQKQT HNALIASEEK IRGMFNGVNE GIIVMDTQGY
ITEVNQTILK MNNYTSKDQM IGRHGLEFIA PKDREEARAY LAQADSLNEV RNLELLCVRP
DGTEYFCQIS GAVLRDYSGE IQGIIILSAD ITEHKKLEQQ LIMTDRMASV GELASGLAHE
INNPLTGIVG FSELLLMNEL EESIKEDVQT IHREALRAAE VVRNLLTFAR QQTPTREAGD
INLSIQKVLE LRKHDHRINN IRCITELDPD LPRVMLDVFQ IQQVLINIII NAEFFLRLKE
HPQITIKTSR RKGYAVISIS DNGPGISPEN IKRIFDPFFT TKEVGKGTGL GLSICHGIIE
EHHGRISAES TPGNGATFRI ELPFADIKPA STADSISPST G