| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0127 |
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| Symbol | |
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| ID | 3230515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 125140 |
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| End bp | 128325 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637119695 |
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| Product | sensory box sensor histidine kinase |
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| Protein accession | YP_180877 |
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| Protein GI | 57235045 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC AGCAATCCCC CCCTCTTTTC AAAGATAAAT ATTTTACATA CGTCACCGGC
TTATCCGTAC TGGTAATCAT CTTAGGATTA TACTCAGTCT TATCCCCGCA GGACTTCGTT
CAAAATGCCA ACTGGAAGCT TTTTGCCACT ATGGTGGAGG CATCTACTAC CATTATTATT
ATCGCCATTG CCACCTGGCG CTGGGGATTA AAAGTTTCCA TAATCTGGGT CAGCAGCATC
CTCATACCGG GTATGCTGCT GATGGTTGGA ATGGACTTGT TTGAGCCGGT TATTTTCTTC
GTTATGCTGC TAACTTTGGG TGCCGGCAGT CTGGTAGGGC TGATAATCAA CAACCACCGG
CGGGTAATAA GCCACGAAGA AGAACTCAAC CAGATACTCT CCATGATACG GGATATAAAC
CACCATATCA CCCATATAGA CAACGAAGAA GAGCTGATGG AAAGGGTGTG CGAAAGACTG
GTCTATGCCG GGCGGTATCA GGTAGCCTGG ATAGGTTATG CAACCCCTGA CCAGCAGACA
GTTGAACCCC GCTATCACGC TGCCAGCGGA CAGCCGTCCC AGCTTCCCGC CGGGGAGTGC
CCGGCACCGC ATTGCCTCTA CCTGCCCGGA GAACCTATCC AGCAGGCTAT AAAAAGCCGC
AGCCTGATAG TAGTTCCAGA CATCCAGACC TGCCCCGGTG ATGATATCTG CTGTCAGCAT
TGCTGCAGCC TGCTTTGTTC GCCTATTGAT TTCGGGGATG AACTGCTGGG GGTATTATGC
GTTTATTCAA ATAACCCGGA CGTATTCGGC AGAGAAGAAA TTTCCCTGCT GCGGGAGGTC
TCCCAGGATA TATCGCTGGG GGTGGAAAAA ATACGCCACC GGCAAGAACT GGCCAGAACT
GAAATCCGGC TGAAAGAAGA ACGAGACAAA GCCCAGTTGT ATTTGGATAT TGCCGGGGTA
ATTATAGTTG TCTTAAGCGA AAACGAGATT GTTTTACAGA TTAACAAGCG GGGCTGCGAA
ATACTGGGTT ATGAATATCA GGAAATTGTG GGGCGCAACT GGTTTGAGAG TTTTGTGCCC
GGTTACCGCC GTCTTATCAA ACACTCCATG TACAAACAAA TTATCTCAGG CAAAGCCGAC
CTGCCGGAAC GCTATATGGA TGTAGTCCTG ACTAAAGACG GCCAGGAAAA GGTGATTTTG
TGGCATTCCA CGGCTATCCG CAGCCAGGAC GGAAAACTTA ATTCAATACT CTATTCGGGT
GAAGACGTCA CCGAGCTTAA ACATATTGAA GAAGCTTTGC GTATGTCCGA GGAAAAGTAC
CACACCCTGT TTGAAACTAT GGCCCAGGGG GCTATTTATA TTGATGATAA GGGCATCATA
ATTGAAACCA ACCCGGCCGC CAATACTATT TTCGGCAGGC ATGAAAGCGA ACTGCTGGGA
ACAAATATTG CCGACCCGGT CTGGACTTAT GTGCAGGAAA ACGGCTCAAT AATGCCGCCG
GAGGAAAACC CGGTAATAAC TGCCCTGAAG ACCGGCAAAG CGGTGCGGAA TGTTTTTATG
GGCATAAAGA ATAACCTTTC CGGTGAGGTC CGCTGGGTCA ACCTGTTTGC CCTGCCGCTG
TTCCGCCTCA ACCAGGAAAA CTCGTACATG GTTTATACCA CCTTCACAGA TATAAGCCGT
CTGAAAAATG CCCGTGATGC CCTTACCCGC AGTGAAAACC GCTACCGCTC TATATTTGAA
ACAGCCGCCA GCATTATTAT TTCGTTTGAC CAGAACGGTA TTATAAATGA CTGCAATATG
CGTGTTCAGG AAATACTGGG CTATACTCCG GCCGAACTGG TGGGGATGAG CTTTCTGGAA
ATTGTGGAAG AACCCTTCCG CCATGAAGTC CGCAGGCATA TTGCCAGCCT AAACCGCGGG
GAAATTATTT ATAACAAGGA TTGCCGTATG CTCCACAAGG ACGGCAAGTA CCGGGATGTA
ATGGTAAACT GCTCTACCCT GCTTGATGAA AACGGCAGCG TAACGAATGC TATCTGCATT
ATCTCTGATA TTACCGAACA GAAACAGACC CATAATGCCT TGATAGCCTC GGAAGAAAAA
ATCCGGGGAA TGTTCAACGG GGTTAACGAA GGCATAATTG TCATGGATAC CCAAGGCTAT
ATTACCGAGG TCAACCAGAC TATACTGAAA ATGAATAACT ACACCAGCAA AGACCAGATG
ATAGGCAGAC ACGGGCTGGA ATTTATTGCC CCCAAAGACC GTGAAGAAGC CAGAGCCTAT
CTGGCCCAGG CAGACAGCCT GAATGAAGTA CGCAATCTGG AACTTCTGTG TGTACGCCCG
GACGGAACGG AATATTTCTG CCAGATAAGC GGAGCGGTAC TGCGTGATTA CTCAGGTGAA
ATCCAGGGCA TAATAATACT CAGTGCGGAT ATTACCGAAC ACAAGAAACT GGAACAGCAG
CTTATCATGA CTGACCGCAT GGCCTCAGTA GGCGAGCTGG CTTCCGGTCT GGCCCACGAG
ATAAACAACC CCCTTACCGG CATTGTCGGC TTCAGCGAAC TTTTGCTGAT GAATGAACTG
GAAGAATCAA TCAAAGAAGA TGTCCAGACT ATTCACCGCG AAGCCCTGCG GGCGGCTGAA
GTAGTCCGCA ATCTGCTCAC TTTTGCCCGT CAGCAAACCC CTACCCGCGA AGCCGGTGAT
ATAAACCTGA GCATTCAGAA GGTGCTTGAA CTGCGCAAAC ATGACCACCG GATAAATAAT
ATCCGCTGCA TAACCGAACT GGACCCCGAC CTGCCGCGGG TAATGCTGGA CGTCTTCCAG
ATACAGCAGG TTTTAATAAA TATTATTATC AACGCAGAGT TCTTCCTGCG CCTTAAGGAA
CACCCCCAGA TAACCATAAA AACCAGCCGC CGCAAAGGTT ATGCAGTAAT CAGTATTTCA
GATAACGGCC CCGGCATCAG CCCTGAAAAC ATCAAACGTA TTTTTGACCC TTTCTTTACC
ACCAAAGAGG TCGGTAAGGG TACCGGACTG GGGCTTTCCA TCTGCCATGG CATTATTGAG
GAACACCATG GCAGAATATC AGCGGAAAGC ACCCCCGGCA ACGGGGCTAC TTTCCGTATA
GAACTGCCGT TTGCGGATAT TAAACCGGCC TCAACCGCTG ACAGCATCAG CCCAAGCACC
GGTTAA
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| Protein sequence | MKNQQSPPLF KDKYFTYVTG LSVLVIILGL YSVLSPQDFV QNANWKLFAT MVEASTTIII
IAIATWRWGL KVSIIWVSSI LIPGMLLMVG MDLFEPVIFF VMLLTLGAGS LVGLIINNHR
RVISHEEELN QILSMIRDIN HHITHIDNEE ELMERVCERL VYAGRYQVAW IGYATPDQQT
VEPRYHAASG QPSQLPAGEC PAPHCLYLPG EPIQQAIKSR SLIVVPDIQT CPGDDICCQH
CCSLLCSPID FGDELLGVLC VYSNNPDVFG REEISLLREV SQDISLGVEK IRHRQELART
EIRLKEERDK AQLYLDIAGV IIVVLSENEI VLQINKRGCE ILGYEYQEIV GRNWFESFVP
GYRRLIKHSM YKQIISGKAD LPERYMDVVL TKDGQEKVIL WHSTAIRSQD GKLNSILYSG
EDVTELKHIE EALRMSEEKY HTLFETMAQG AIYIDDKGII IETNPAANTI FGRHESELLG
TNIADPVWTY VQENGSIMPP EENPVITALK TGKAVRNVFM GIKNNLSGEV RWVNLFALPL
FRLNQENSYM VYTTFTDISR LKNARDALTR SENRYRSIFE TAASIIISFD QNGIINDCNM
RVQEILGYTP AELVGMSFLE IVEEPFRHEV RRHIASLNRG EIIYNKDCRM LHKDGKYRDV
MVNCSTLLDE NGSVTNAICI ISDITEQKQT HNALIASEEK IRGMFNGVNE GIIVMDTQGY
ITEVNQTILK MNNYTSKDQM IGRHGLEFIA PKDREEARAY LAQADSLNEV RNLELLCVRP
DGTEYFCQIS GAVLRDYSGE IQGIIILSAD ITEHKKLEQQ LIMTDRMASV GELASGLAHE
INNPLTGIVG FSELLLMNEL EESIKEDVQT IHREALRAAE VVRNLLTFAR QQTPTREAGD
INLSIQKVLE LRKHDHRINN IRCITELDPD LPRVMLDVFQ IQQVLINIII NAEFFLRLKE
HPQITIKTSR RKGYAVISIS DNGPGISPEN IKRIFDPFFT TKEVGKGTGL GLSICHGIIE
EHHGRISAES TPGNGATFRI ELPFADIKPA STADSISPST G
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