Gene DET0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0090 
Symbol 
ID3229007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp87234 
End bp88049 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID637119659 
Productradical SAM domain-containing protein 
Protein accessionYP_180841 
Protein GI57233546 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGAATA CACAGGTCTT TCATATAGGC TATTGCCCTG AACTAAAGGA AGCCACACTC 
CACTACTGGG GTTGCAATTT TAAATGCCGG GGGTGTTCCT GCCAGAAACT GATATGGGAC
TGGATGTTAG AAGAGTTTTT AGATGCCAGA GATGCAGAGC CTTTGGAAAT TGCAGATGCT
CCGCACAGGT TTCTGAGCAT TAGTGAGATA AGTGCGGCTC TGGAAAAATT GGAACTCCGG
AGAGTGCTGC ATATGGGACA GGAAGCAATA CTGGACCCTG CTTATCCGGT ACTGGCAGAG
ATGATACATA GAAGATTTGG ATGCAAAAAT GTGCTCTTAA CAAACGGGTA TGAGATGCCC
GACCTCAGGC ACACTGATAA AGTGGAATTC GGGATTAAGG CCATAACTAA CGGATTGCAT
CGCCACTATA CCGGTAAATC AAATAAGAGG GTTCTGCGGA ATTTCAAGGA GATATACAAC
TCAGGCGTAG AGATGGTGAT TGAGTCGGTA TTTATTCCCG GTTATATAGA TGTTGCCGAA
ACAGAAAGAA TTGTCGACTT TATTGCGGGG GTAGATAAAA AACTGACTTA TGTGTTGTTA
CCCTACTTCA AAGCTGGAAA TAACCCGTGG CGCCGGCCTA CACCTGCTGA AATGGAAATG
GCCGCTAATA TTGCCCGGAA GAAACTAACG AATGTGTATT TTTTCAGAGG AGATGAAGAC
CTGCAGTATA AAGTCATAAG TATTTTCCCT GAAGCGGGCA GCAATACAGA GCTGGAGATA
TCTGAAACCC ATTGTGGTGT CTTAAATCCG GTATAA
 
Protein sequence
MMNTQVFHIG YCPELKEATL HYWGCNFKCR GCSCQKLIWD WMLEEFLDAR DAEPLEIADA 
PHRFLSISEI SAALEKLELR RVLHMGQEAI LDPAYPVLAE MIHRRFGCKN VLLTNGYEMP
DLRHTDKVEF GIKAITNGLH RHYTGKSNKR VLRNFKEIYN SGVEMVIESV FIPGYIDVAE
TERIVDFIAG VDKKLTYVLL PYFKAGNNPW RRPTPAEMEM AANIARKKLT NVYFFRGDED
LQYKVISIFP EAGSNTELEI SETHCGVLNP V