Gene DET0087 details

Gene Information

• Locus tag: DET0087
• ID: 3229010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 83691
• End bp: 85808
• Gene Length: 2118 bp
• Protein Length: 705 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637119656
• Product: hypothetical protein
• Protein accession: YP_180838
• Protein GI: 57233549

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.130469
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCCCACG GGAATGTAAT AGGTAAAGCC AGCCCCAATG TTGTAGGGTT CCTACCTTCC 
GGCACAAAGG TGTATGGAGA GGGTAGAGTA GTAGTTGGGC AGATTAAGGA AACACCTACT 
TTCGCCATCT TCTATAATTC AGGATTATCA CGCCTGCCAA ATGCAATTTC AGATGCAAGA 
AGTATGGATG AAATGGCATC TAAGGCCTGG AGTTATGTTA AAAGCGATAA ATCTACCGGA 
GAAATATACC CTGTATTTAA GCAATACGCC AAGTATATAG AAGACGAAGC CTTGATGACT 
CCTGGCAGCC GGGCTATACC TGTACTGGAT GACAGGGGTA AACCGGTAGT TTTAAACACT 
GTCGGCCCGG ATGGGAAGAA AATCAATGTT CCCCTGCTAC AAATGGTTAC TCCGGACTGG 
TTCGAAAAAA GCCTGGAGAT TACCAGAGCA CTGGCCGGCA AAGCAGATAC GCTTAAACCT 
CGTCCACTCT CCCAGGTAAT AGGCAAAGTA GAATCGCTGC CCAGAGGTAT GGATGAGGAT 
TTCATAGCAT ATATGCGTAA GAATCCTGAT AATGTACTTT ATGGCAGTAC CGCTGAATAT 
ACATTCACCG GGGGCAGAAA GCCCGGGGAT TTGGATATTC AGTCTCCTAC CCCGGAAAAG 
ACCGCTAATG ATATTGCTGA TATATCCCGC CGCTATACGG CGAATGATGT TAAGGTAAGT 
AAGGTATCTA GCCATTACAC CGTATCCCAA CTCAAAAATG GTTTGTGGAA AAATATTGCT 
GACATATCTG AATTGGGCTG GAAAAAAGCC GATGCAGGAT TCAAAAGGCT GAATGCGCCT 
ATCAATACAG TCAAGGTTGA AGGCATTACT ATGGAAGCTC CCAGTACTCA GCTTTACAGC 
TTATTGAACC GGACAGTGGT CAGCTTTGAA AAACAGGATC GCTTTACCGC TATGGTGAGC 
AAACTGGGCG GCGAGCTTGA TCTTGGCATT GGAGCCAAAG CCCCTACTCT GGCAGATTTG 
TATAAACTGA AGGCTCGCGG TATCTACAAT ACAGTCCGGG ATATTTTTGT CCCGAACCTG 
CAAAAGAAAA TTAACTATGA AGCCCTAACT AAATCTAATC CGGAGCTAGC GGGTAAGATT 
GAAAAGGTCT TTACCTCTGA AGCCGATACC CAAAAGGCTT TACTGGCTGA GATACGTGAA 
AAATCCCCAA AACTGGCGGA GAAACTGGAA GAGTTACTGG ATGAAAGGAA TATGTCCAAC 
GCAGCCCGTT TAGAAGCTGC CCGGCAAATA GCTCCAGATC TAGTGCCTGA AGTAAGGGAA 
TTATTGCGTG CTGAGCAGCA GTCAATAGCA GCTGCCCGAT CAGCGGCCAT GACAGCCGGA 
AAAGATGGAC GTGCCAGTGC CTTAATCGTA GCCGGCAGGC TGACAAAAGC ATTTGATACC 
GAACGCAGAC GGCTTGAGGG TGAAATAGAA CGCCGGGCAA AAGTTATCCA GCGTGAGTTA 
CGAAAACTGC CTGTGCGTAT GCCTAATTTT GGTGATATGA GCAAAACCAA AATTACCGCT 
AAAACACTGG AAAGGAAACT GCACACTGGC GGAGGTGACT ATACCAGCCT GCGCAGCCGG 
ATACCGCCAT CCAGAGGTGA AAGGGTGCCG CCACCGAGGG TTCCTACCCT TAATCCACCG 
GATAACCCGC CGCCGAGGGT TGACCCTCAG CGCATTAAGC CGCCAGATTT TGATTACAGG 
CACGAAAATA GAAGAAATGA CAGTGATGAA ACCTCATCTA CTGCCCGTCC TAAACTGAAA 
AACGGAGATG TAGCATGGAG ACAGGGGGCT TTGGGCAGTG GTGACGATCA GCGTCCTGTC 
TGGTATATAA AGCGAGCCAA TGGCAAGGTG GATATAGTTT TCCAGCCGCC TGAAGATGCC 
CCGAGACTGG AAGGAACTCC TGAAGAGACA TTTTTCACCA GAGGTAAAAA ACCGCCCACC 
AATCTTACAC AGAACATGGG CGTTACCACA GCTAAAATAA ATTTGAAGGA CGACCCTGAA 
ATTAAGTTTG TCCAGACTAA GGCGCCGAAG TTTAAGCCAT ATATCCCAAA GAGTGTCCGG 
CGGTCTATAG GCATGTGA 

 

Protein sequence

MPHGNVIGKA SPNVVGFLPS GTKVYGEGRV VVGQIKETPT FAIFYNSGLS RLPNAISDAR 
SMDEMASKAW SYVKSDKSTG EIYPVFKQYA KYIEDEALMT PGSRAIPVLD DRGKPVVLNT 
VGPDGKKINV PLLQMVTPDW FEKSLEITRA LAGKADTLKP RPLSQVIGKV ESLPRGMDED 
FIAYMRKNPD NVLYGSTAEY TFTGGRKPGD LDIQSPTPEK TANDIADISR RYTANDVKVS 
KVSSHYTVSQ LKNGLWKNIA DISELGWKKA DAGFKRLNAP INTVKVEGIT MEAPSTQLYS 
LLNRTVVSFE KQDRFTAMVS KLGGELDLGI GAKAPTLADL YKLKARGIYN TVRDIFVPNL 
QKKINYEALT KSNPELAGKI EKVFTSEADT QKALLAEIRE KSPKLAEKLE ELLDERNMSN 
AARLEAARQI APDLVPEVRE LLRAEQQSIA AARSAAMTAG KDGRASALIV AGRLTKAFDT 
ERRRLEGEIE RRAKVIQREL RKLPVRMPNF GDMSKTKITA KTLERKLHTG GGDYTSLRSR 
IPPSRGERVP PPRVPTLNPP DNPPPRVDPQ RIKPPDFDYR HENRRNDSDE TSSTARPKLK 
NGDVAWRQGA LGSGDDQRPV WYIKRANGKV DIVFQPPEDA PRLEGTPEET FFTRGKKPPT 
NLTQNMGVTT AKINLKDDPE IKFVQTKAPK FKPYIPKSVR RSIGM