Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0080 |
Symbol | |
ID | 3229016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 79177 |
End bp | 79710 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637119650 |
Product | hypothetical protein |
Protein accession | YP_180832 |
Protein GI | 57233554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000124553 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAACG AGCGTGATAT GGATTTAAAT AACATTAAGC AGCAGGAAGA TAGAATTAAT ACCTACGGGG AAGAGTATGT AAATCTCTCA TTAATGAGTA TAATAACACT TATTGGAACC ATAGCAATGC GAAACTACAA ATATACTATG GGTGAGTATA GTGAAAACCT AACACCGAAT GAGAGCAGTT TACTTATGGA AGTATATTTT AGAGAAGAAA TCGGAATCAT TGACGCATGC AGGGCAACTG GTTTAAGCAC TGAGAATGTC TTGCATTTAT TCTCTAATAT ATATAACAAA GGCTACCTAA AGAAAGTAAA AAAGGGTAAG AAAACTTATT ATAGTATCGC AGATAACCCA CCGGGGGATT GGCAGGATGT TTTAGAAGGT TATCAAAAAG CAACAGATGC TTGTAACTAT TTTTGTAAAG ACTTAAGTGA TGAAAAGAAG CAAGAAATTT GGGATATGCT TTTGGATATA AGGCATAATG TGAATGATTA CCATGTTCGC ATGTCAGGCA TTAGCTTTCT CTAA
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Protein sequence | MGNERDMDLN NIKQQEDRIN TYGEEYVNLS LMSIITLIGT IAMRNYKYTM GEYSENLTPN ESSLLMEVYF REEIGIIDAC RATGLSTENV LHLFSNIYNK GYLKKVKKGK KTYYSIADNP PGDWQDVLEG YQKATDACNY FCKDLSDEKK QEIWDMLLDI RHNVNDYHVR MSGISFL
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