Gene DET0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0079 
SymboltceA 
ID3229017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp77229 
End bp78893 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content48% 
IMG OID637119649 
Producttrichloroethene reductive dehalogenase 
Protein accessionYP_180831 
Protein GI57233555 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00164109 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AATATCATTC TACAGTCACA AGGCGTGATT TCATGAAGAG ATTAGGTTTG 
GCAGGAGCCG GTGCGGGGGC ACTGGGTGCC GCAGTACTTG CAGAGAATAA CCTGCCGCAT
GAGTTTAAAG ATGTTGATGA CCTGCTGTCA GCAGGTAAAG CTTTAGAGGG TGACCACGCT
AATAAAGTAA ACAATCATCC ATGGTGGGTT ACCACGCGTG ATCATGAGGA TCCAACCTGT
AATATAGATT GGAGCCTTAT AAAAAGATAC AGCGGTTGGA ACAACCAGGG AGCATACTTC
TTACCTGAGG ATTACCTGTC TCCAACCTAT ACAGGTAGAA GACATACCAT TGTTGATTCA
AAACTAGAAA TAGAATTACA GGGTAAAAAA TACCGTGATA GTGCCTTTAT AAAATCAGGC
ATAGACTGGA TGAAGGAAAA TATTGATCCA GATTATGACC CTGGTGAACT GGGCTATGGC
GACCGCAGGG AAGATGCCCT AATATATGCC GCCACGAATG GCTCACATAA TTGCTGGGAG
AACCCGCTTT ATGGACGCTA TGAAGGTTCT AGGCCTTATC TCTCTATGCG AACCATGAAT
GGAATAAACG GCTTGCATGA ATTTGGTCAC GCAGATATCA AAACCACCAA CTACCCGAAG
TGGGAGGGTA CGCCTGAAGA GAACCTGTTA ATCATGCGCA CCGCCGCGCG CTACTTCGGG
GCTTCTTCCG TTGGCGCCAT TAAGATAACG GATAACGTGA AGAAAATCTT CTATGCCAAA
GTCCAGCCCT TTTGCCTCGG GCCTTGGTAT ACGATTACAA ATATGGCTGA ATACATTGAA
TATCCGGTCC CAGTAGATAA TTATGCCATA CCCATTGTGT TTGAAGATAT CCCTGCAGAC
CAGGGGCATT ACAGCTACAA ACGCTTTGGC GGTGATGATA AGATAGCAGT ACCCAATGCA
CTGGATAACA TCTTCACCTA TACCATCATG CTCCCTGAGA AGCGCTTTAA ATATGCACAC
TCTATACCTA TGGACCCATG CTCTTGTATT GCCTATCCCC TCTTTACAGA GGTTGAGGCA
CGCATTCAGC AATTCATTGC AGGCCTTGGC TATAACTCGA TGGGTGGTGG AGTTGAAGCT
TGGGGTCCGG GCAGTGCCTT CGGCAACTTA AGTGGCCTTG GGGAACAATC ACGCGTATCA
AGCATTATTG AGCCCCGCTA CGGTTCCAAC ACCAAGGGTT CCCTAAGGAT GCTTACCGAC
CTGCCTCTTG CCCCCACCAA GCCTATAGAT GCCGGTATCC GCGAGTTCTG TAAGACCTGC
GGCATCTGTG CCGAGCATTG TCCTACCCAA GCTATCTCGC ATGAAGGGCC GCGCTATGAC
TCACCACACT GGGATTGCGT AAGCGGTTAT GAGGGCTGGC ACCTTGACTA TCACAAATGC
ATTAACTGTA CCATCTGTGA GGCCGTCTGC CCCTTCTTCA CTATGAGCAA TAACTCCTGG
GTGCACAACT TGGTCAAGTC CACTGTTGCC ACTACGCCCG TTTTTAACGG TTTCTTTAAG
AATATGGAAG GAGCCTTCGG CTACGGCCCG CGCTACTCAC CAAGCAGGGA TGAATGGTGG
GCCTCAGAAA ACCCAATACG CGGCGCAAGC GTAGATATTT TTTAA
 
Protein sequence
MSEKYHSTVT RRDFMKRLGL AGAGAGALGA AVLAENNLPH EFKDVDDLLS AGKALEGDHA 
NKVNNHPWWV TTRDHEDPTC NIDWSLIKRY SGWNNQGAYF LPEDYLSPTY TGRRHTIVDS
KLEIELQGKK YRDSAFIKSG IDWMKENIDP DYDPGELGYG DRREDALIYA ATNGSHNCWE
NPLYGRYEGS RPYLSMRTMN GINGLHEFGH ADIKTTNYPK WEGTPEENLL IMRTAARYFG
ASSVGAIKIT DNVKKIFYAK VQPFCLGPWY TITNMAEYIE YPVPVDNYAI PIVFEDIPAD
QGHYSYKRFG GDDKIAVPNA LDNIFTYTIM LPEKRFKYAH SIPMDPCSCI AYPLFTEVEA
RIQQFIAGLG YNSMGGGVEA WGPGSAFGNL SGLGEQSRVS SIIEPRYGSN TKGSLRMLTD
LPLAPTKPID AGIREFCKTC GICAEHCPTQ AISHEGPRYD SPHWDCVSGY EGWHLDYHKC
INCTICEAVC PFFTMSNNSW VHNLVKSTVA TTPVFNGFFK NMEGAFGYGP RYSPSRDEWW
ASENPIRGAS VDIF