Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0079 |
Symbol | tceA |
ID | 3229017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 77229 |
End bp | 78893 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637119649 |
Product | trichloroethene reductive dehalogenase |
Protein accession | YP_180831 |
Protein GI | 57233555 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00164109 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AATATCATTC TACAGTCACA AGGCGTGATT TCATGAAGAG ATTAGGTTTG GCAGGAGCCG GTGCGGGGGC ACTGGGTGCC GCAGTACTTG CAGAGAATAA CCTGCCGCAT GAGTTTAAAG ATGTTGATGA CCTGCTGTCA GCAGGTAAAG CTTTAGAGGG TGACCACGCT AATAAAGTAA ACAATCATCC ATGGTGGGTT ACCACGCGTG ATCATGAGGA TCCAACCTGT AATATAGATT GGAGCCTTAT AAAAAGATAC AGCGGTTGGA ACAACCAGGG AGCATACTTC TTACCTGAGG ATTACCTGTC TCCAACCTAT ACAGGTAGAA GACATACCAT TGTTGATTCA AAACTAGAAA TAGAATTACA GGGTAAAAAA TACCGTGATA GTGCCTTTAT AAAATCAGGC ATAGACTGGA TGAAGGAAAA TATTGATCCA GATTATGACC CTGGTGAACT GGGCTATGGC GACCGCAGGG AAGATGCCCT AATATATGCC GCCACGAATG GCTCACATAA TTGCTGGGAG AACCCGCTTT ATGGACGCTA TGAAGGTTCT AGGCCTTATC TCTCTATGCG AACCATGAAT GGAATAAACG GCTTGCATGA ATTTGGTCAC GCAGATATCA AAACCACCAA CTACCCGAAG TGGGAGGGTA CGCCTGAAGA GAACCTGTTA ATCATGCGCA CCGCCGCGCG CTACTTCGGG GCTTCTTCCG TTGGCGCCAT TAAGATAACG GATAACGTGA AGAAAATCTT CTATGCCAAA GTCCAGCCCT TTTGCCTCGG GCCTTGGTAT ACGATTACAA ATATGGCTGA ATACATTGAA TATCCGGTCC CAGTAGATAA TTATGCCATA CCCATTGTGT TTGAAGATAT CCCTGCAGAC CAGGGGCATT ACAGCTACAA ACGCTTTGGC GGTGATGATA AGATAGCAGT ACCCAATGCA CTGGATAACA TCTTCACCTA TACCATCATG CTCCCTGAGA AGCGCTTTAA ATATGCACAC TCTATACCTA TGGACCCATG CTCTTGTATT GCCTATCCCC TCTTTACAGA GGTTGAGGCA CGCATTCAGC AATTCATTGC AGGCCTTGGC TATAACTCGA TGGGTGGTGG AGTTGAAGCT TGGGGTCCGG GCAGTGCCTT CGGCAACTTA AGTGGCCTTG GGGAACAATC ACGCGTATCA AGCATTATTG AGCCCCGCTA CGGTTCCAAC ACCAAGGGTT CCCTAAGGAT GCTTACCGAC CTGCCTCTTG CCCCCACCAA GCCTATAGAT GCCGGTATCC GCGAGTTCTG TAAGACCTGC GGCATCTGTG CCGAGCATTG TCCTACCCAA GCTATCTCGC ATGAAGGGCC GCGCTATGAC TCACCACACT GGGATTGCGT AAGCGGTTAT GAGGGCTGGC ACCTTGACTA TCACAAATGC ATTAACTGTA CCATCTGTGA GGCCGTCTGC CCCTTCTTCA CTATGAGCAA TAACTCCTGG GTGCACAACT TGGTCAAGTC CACTGTTGCC ACTACGCCCG TTTTTAACGG TTTCTTTAAG AATATGGAAG GAGCCTTCGG CTACGGCCCG CGCTACTCAC CAAGCAGGGA TGAATGGTGG GCCTCAGAAA ACCCAATACG CGGCGCAAGC GTAGATATTT TTTAA
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Protein sequence | MSEKYHSTVT RRDFMKRLGL AGAGAGALGA AVLAENNLPH EFKDVDDLLS AGKALEGDHA NKVNNHPWWV TTRDHEDPTC NIDWSLIKRY SGWNNQGAYF LPEDYLSPTY TGRRHTIVDS KLEIELQGKK YRDSAFIKSG IDWMKENIDP DYDPGELGYG DRREDALIYA ATNGSHNCWE NPLYGRYEGS RPYLSMRTMN GINGLHEFGH ADIKTTNYPK WEGTPEENLL IMRTAARYFG ASSVGAIKIT DNVKKIFYAK VQPFCLGPWY TITNMAEYIE YPVPVDNYAI PIVFEDIPAD QGHYSYKRFG GDDKIAVPNA LDNIFTYTIM LPEKRFKYAH SIPMDPCSCI AYPLFTEVEA RIQQFIAGLG YNSMGGGVEA WGPGSAFGNL SGLGEQSRVS SIIEPRYGSN TKGSLRMLTD LPLAPTKPID AGIREFCKTC GICAEHCPTQ AISHEGPRYD SPHWDCVSGY EGWHLDYHKC INCTICEAVC PFFTMSNNSW VHNLVKSTVA TTPVFNGFFK NMEGAFGYGP RYSPSRDEWW ASENPIRGAS VDIF
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