Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0071 |
Symbol | |
ID | 3229004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 66131 |
End bp | 67672 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119641 |
Product | SNF2 family helicase |
Protein accession | YP_180823 |
Protein GI | 57233543 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGGGAT GCCTGACCGC ATCGTGCTTC TACCGGGTGG TCACATCGCT TTTGTTGAAG TTAAAGCTCC AGGCGAAAAG CCCAGACCAC TTCAGCTGGC AAGGCACAAA TTATTACGCG TGCTTGGCTT CAAGGTTTAT GTCCTTGATG ACGAGCAGCA GATTGGAGGG TTTCTTGATG AAATACGAAC CACATAACTA CCAGATATAC GCCACCCGCT ACATCGAGGA GCACCCCATC TCCGCTGTTT TACTCGATAT GGGTCTTGGC AAAACGAGCA TCACACTGAC GGCGCTGAAC GACCTATTGT TTGACAGCTT CGAGGCACAC CGCATTCTGG TTATTGCACC ACTACGAGTG GCACGGGATA CATGGCCTGC TGAAGCAGAT AAGTGGGATC ATCTCCAGAA CCTCATCTGC TCCGTTGCAG TCGGCACTGA AGCAGAGCGT CGTGCGGCCC TTATCAAACC CGCTGACATC TACATCATAA ACAGAGAAAA TGTCCAGTGG CTTATTGAAG AAAGTAAGCT GCCATTCAAC TTCGATACAC TTGTGGTTGA CGAGCTATCC TCCTTCAAGA ATTATCAGGC TAAACGCTTC CGGGCTCTGA TGAAGGTGAG GCCCAAAGTC AAGCGTATCA TCGGCCTCAC GGGTACCCCT TCCGCAAATG GCCTCATGGA CCTCTGGGCT GAGTTCAGGC TTCTGGATAT GGGTGCCCGC CTCGGACGGT TTATCAGCCA CTACCGACTG GATTACTTCC AGCCAGATAA ACGTAACGGA CAGGTCATCT TCAGCTACAA GCCTCTATCC GGAGCGGAAC AACGCATCTA TGACAAGATC TCCGACATCA CCATTTCCAT GAAGTCTACC GACCTTTTGA AAATGCCGGA GTTGGTCAGC AGCGAATACA CCGTCCGCCT CTCTGATGAG GAGCGCCAGC GTTATGACGA GCTGAAGCAG GATCTCGTCT TGCAACTCCC TGACGGAGAC ATCACCGCTG CAAATGCTGC TGCGCTCACC GGAAAGTTAT GCCAGCTGGC TAATGGTGCG ATCTACACGG ACGATGGCGA CACCTTCACT ATCCATGACA GAAAACTGGA TGCACTTGAG AATATCATCG AAGCGGCCAG TGGCAAGCCG ATTCTTGTGG CTTACTGGTT CAAGCATGAC CTTGCCCGCA TTACAGAGCG TCTACAAAAA CTCCATATCC CGTTCTCCAA ACTGGACAGC GCCGACAGTA TCCGAAAGTG GAACGCTGGC GAATTACCCG TAGCACTGAT CCACCCCGCC TCTGCCGGTC ATGGTTTAAA CCTGCAGAGT GGCGGTTCCT GTATTGTTTG GTTCGGGCTG ACCTGGTCAC TAGAATTATA TCAGCAGACC AACGCCCGCC TGTGGCGACA GGGGCAAAAC GCTGAAACGG TTGTGGTGCA GCACATTGTG GCCAAAGACA CCATCGACGA GCGGATTCTG AAGGTGTTAT CCAAGAAGGA CAGCACTCAA GCCGCCTTGA TAGCTGCTGT AAAGGCCGAC CTGCAAGTCT GA
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Protein sequence | MTGCLTASCF YRVVTSLLLK LKLQAKSPDH FSWQGTNYYA CLASRFMSLM TSSRLEGFLM KYEPHNYQIY ATRYIEEHPI SAVLLDMGLG KTSITLTALN DLLFDSFEAH RILVIAPLRV ARDTWPAEAD KWDHLQNLIC SVAVGTEAER RAALIKPADI YIINRENVQW LIEESKLPFN FDTLVVDELS SFKNYQAKRF RALMKVRPKV KRIIGLTGTP SANGLMDLWA EFRLLDMGAR LGRFISHYRL DYFQPDKRNG QVIFSYKPLS GAEQRIYDKI SDITISMKST DLLKMPELVS SEYTVRLSDE ERQRYDELKQ DLVLQLPDGD ITAANAAALT GKLCQLANGA IYTDDGDTFT IHDRKLDALE NIIEAASGKP ILVAYWFKHD LARITERLQK LHIPFSKLDS ADSIRKWNAG ELPVALIHPA SAGHGLNLQS GGSCIVWFGL TWSLELYQQT NARLWRQGQN AETVVVQHIV AKDTIDERIL KVLSKKDSTQ AALIAAVKAD LQV
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