Gene DET0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0071 
Symbol 
ID3229004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp66131 
End bp67672 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content52% 
IMG OID637119641 
ProductSNF2 family helicase 
Protein accessionYP_180823 
Protein GI57233543 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGGGAT GCCTGACCGC ATCGTGCTTC TACCGGGTGG TCACATCGCT TTTGTTGAAG 
TTAAAGCTCC AGGCGAAAAG CCCAGACCAC TTCAGCTGGC AAGGCACAAA TTATTACGCG
TGCTTGGCTT CAAGGTTTAT GTCCTTGATG ACGAGCAGCA GATTGGAGGG TTTCTTGATG
AAATACGAAC CACATAACTA CCAGATATAC GCCACCCGCT ACATCGAGGA GCACCCCATC
TCCGCTGTTT TACTCGATAT GGGTCTTGGC AAAACGAGCA TCACACTGAC GGCGCTGAAC
GACCTATTGT TTGACAGCTT CGAGGCACAC CGCATTCTGG TTATTGCACC ACTACGAGTG
GCACGGGATA CATGGCCTGC TGAAGCAGAT AAGTGGGATC ATCTCCAGAA CCTCATCTGC
TCCGTTGCAG TCGGCACTGA AGCAGAGCGT CGTGCGGCCC TTATCAAACC CGCTGACATC
TACATCATAA ACAGAGAAAA TGTCCAGTGG CTTATTGAAG AAAGTAAGCT GCCATTCAAC
TTCGATACAC TTGTGGTTGA CGAGCTATCC TCCTTCAAGA ATTATCAGGC TAAACGCTTC
CGGGCTCTGA TGAAGGTGAG GCCCAAAGTC AAGCGTATCA TCGGCCTCAC GGGTACCCCT
TCCGCAAATG GCCTCATGGA CCTCTGGGCT GAGTTCAGGC TTCTGGATAT GGGTGCCCGC
CTCGGACGGT TTATCAGCCA CTACCGACTG GATTACTTCC AGCCAGATAA ACGTAACGGA
CAGGTCATCT TCAGCTACAA GCCTCTATCC GGAGCGGAAC AACGCATCTA TGACAAGATC
TCCGACATCA CCATTTCCAT GAAGTCTACC GACCTTTTGA AAATGCCGGA GTTGGTCAGC
AGCGAATACA CCGTCCGCCT CTCTGATGAG GAGCGCCAGC GTTATGACGA GCTGAAGCAG
GATCTCGTCT TGCAACTCCC TGACGGAGAC ATCACCGCTG CAAATGCTGC TGCGCTCACC
GGAAAGTTAT GCCAGCTGGC TAATGGTGCG ATCTACACGG ACGATGGCGA CACCTTCACT
ATCCATGACA GAAAACTGGA TGCACTTGAG AATATCATCG AAGCGGCCAG TGGCAAGCCG
ATTCTTGTGG CTTACTGGTT CAAGCATGAC CTTGCCCGCA TTACAGAGCG TCTACAAAAA
CTCCATATCC CGTTCTCCAA ACTGGACAGC GCCGACAGTA TCCGAAAGTG GAACGCTGGC
GAATTACCCG TAGCACTGAT CCACCCCGCC TCTGCCGGTC ATGGTTTAAA CCTGCAGAGT
GGCGGTTCCT GTATTGTTTG GTTCGGGCTG ACCTGGTCAC TAGAATTATA TCAGCAGACC
AACGCCCGCC TGTGGCGACA GGGGCAAAAC GCTGAAACGG TTGTGGTGCA GCACATTGTG
GCCAAAGACA CCATCGACGA GCGGATTCTG AAGGTGTTAT CCAAGAAGGA CAGCACTCAA
GCCGCCTTGA TAGCTGCTGT AAAGGCCGAC CTGCAAGTCT GA
 
Protein sequence
MTGCLTASCF YRVVTSLLLK LKLQAKSPDH FSWQGTNYYA CLASRFMSLM TSSRLEGFLM 
KYEPHNYQIY ATRYIEEHPI SAVLLDMGLG KTSITLTALN DLLFDSFEAH RILVIAPLRV
ARDTWPAEAD KWDHLQNLIC SVAVGTEAER RAALIKPADI YIINRENVQW LIEESKLPFN
FDTLVVDELS SFKNYQAKRF RALMKVRPKV KRIIGLTGTP SANGLMDLWA EFRLLDMGAR
LGRFISHYRL DYFQPDKRNG QVIFSYKPLS GAEQRIYDKI SDITISMKST DLLKMPELVS
SEYTVRLSDE ERQRYDELKQ DLVLQLPDGD ITAANAAALT GKLCQLANGA IYTDDGDTFT
IHDRKLDALE NIIEAASGKP ILVAYWFKHD LARITERLQK LHIPFSKLDS ADSIRKWNAG
ELPVALIHPA SAGHGLNLQS GGSCIVWFGL TWSLELYQQT NARLWRQGQN AETVVVQHIV
AKDTIDERIL KVLSKKDSTQ AALIAAVKAD LQV